HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:24.6 nTPM
HPA:24.6 nTPM
GTEx:22.4 nTPM
FANTOM5:20.9 Scaled Tags Per Million
Pig:16.0 nTPM
Mouse:33.2 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028377Antibody HPA028438
Glial cells MediumNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.6
Sample id Sample description nTPM
Hippocampus
nTPM: 24.4
1898 Male, age 80, left hemisphere 25.4
1855 Male, age 76, left hemisphere 25.3
2148 Female, age 91, left hemisphere 25.0
2621 Female, age 67, right hemisphere 23.9
1911 Female, age 85, right hemisphere 23.8
2529 Female, age 94, left hemisphere 23.0
Dentate gyrus
nTPM: 24.5
2010 Male, age 76, both hemispheres 25.2
1927 Female, age 91, both hemispheres 25.1
2528 Male, age 74, both hemispheres 24.5
2531 Female, age 67, both hemispheres 24.4
2246 Female, age 85, both hemispheres 24.0
2530 Female, age 94, left hemisphere 23.7
Entorhinal gyrus
nTPM: 24.1
2764 Male, age 80, right hemisphere 25.1
2613 Female, age 94, left hemisphere 24.8
1787 Male, age 76, left hemisphere 23.8
1938 Female, age 85, left hemisphere 23.7
2686 Male, age 75, right hemisphere 23.6
2117 Female, age 91, right hemisphere 23.5
Hippocampus, CA1
nTPM: 24.6
2749 Male, age 80, left hemisphere 28.0
1873 Female, age 85, both hemispheres 25.8
2527 Male, age 74, both hemispheres 23.5
2082 Female, age 91, right hemisphere 23.0
2045 Male, age 76, both hemispheres 22.8
Hippocampus, CA2
nTPM: 24.6
1963 Male, age 80, left hemisphere 27.5
1892 Male, age 76, both hemispheres 25.9
2249 Male, age 74, both hemispheres 23.8
1940 Female, age 85, left hemisphere 23.6
2113 Female, age 91, right hemisphere 23.4
2437 Female, age 94, left hemisphere 23.1
Hippocampus, CA3
nTPM: 24.5
2620 Female, age 94, left hemisphere 26.7
2137 Male, age 80, left hemisphere 25.0
1891 Female, age 85, both hemispheres 24.2
1867 Male, age 76, both hemispheres 24.0
2436 Male, age 74, both hemispheres 23.9
2861 Female, age 67, both hemispheres 23.1
Parahippocampal cortex
nTPM: 24.0
1850 Male, age 80, both hemispheres 25.4
2693 Female, age 94, both hemispheres 24.6
2018 Male, age 76, both hemispheres 24.3
2692 Male, age 74, both hemispheres 24.3
1933 Female, age 85, both hemispheres 24.2
2532 Female, age 72, left hemisphere 24.1
1990 Female, age 91, right hemisphere 23.6
2622 Female, age 67, right hemisphere 23.6
2250 Female, age 67, right hemisphere 23.2
2245 Female, age 91, both hemispheres 22.9
Perirhinal gyrus
nTPM: 24.3
1841 Female, age 85, right hemisphere 25.5
1794 Male, age 80, right hemisphere 25.2
2521 Female, age 94, right hemisphere 24.1
1847 Female, age 91, left hemisphere 24.0
2848 Male, age 76, right hemisphere 23.1
Subiculum
nTPM: 23.7
2042 Male, age 76, both hemispheres 24.7
1977 Female, age 85, both hemispheres 24.2
1901 Male, age 80, both hemispheres 23.9
2619 Male, age 74, both hemispheres 23.7
2729 Female, age 91, right hemisphere 23.6
2438 Female, age 94, left hemisphere 22.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.4
Samples: 197

Max nTPM: 40.2
Min nTPM: 14.1
Std nTPM: 4.7
Median nTPM: 21.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 40.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 37.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 36.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 36.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 34.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 34.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 33.2
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 32.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 31.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 31.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 31.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.9
FF:10153-102I9 76 years, female 23.0
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 18.9
Min nTPM: 13.4
Sample A Female 18.9
Sample B Female 15.2
Sample C Male 16.4
Sample D Male 13.4
Entorhinal cortex
nTPM: 15.7
Samples: 4

Max nTPM: 18.2
Min nTPM: 14.0
Sample A Female 15.6
Sample B Female 18.2
Sample C Male 15.1
Sample D Male 14.0
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 16.3
Min nTPM: 11.3
Sample A Female 16.3
Sample B Female 13.4
Sample C Male 11.3
Sample D Male 14.0
Ventral hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 15.8
Min nTPM: 10.8
Sample A Female 15.3
Sample B Female 10.8
Sample C Male 14.5
Sample D Male 15.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.1
Samples: 4

Max nTPM: 35.3
Min nTPM: 28.8
Sample A Male 32.6
Sample B Male 35.3
Sample C Female 31.8
Sample D Female 28.8
Hippocampal formation
nTPM: 33.2
Samples: 4

Max nTPM: 37.7
Min nTPM: 29.8
Sample A Male 37.7
Sample B Male 35.2
Sample C Female 29.8
Sample D Female 30.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
112196048 Antisense, RP_110421_01_D12, Mouse strain C57BL/6J (56 days, male) 2.8
1596 Antisense, RP_040428_01_E10, Mouse strain C57BL/6J (56 days, male) 0.1

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