HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:23.8 nTPM
HPA:23.8 nTPM
GTEx:27.9 nTPM
FANTOM5:40.0 Scaled Tags Per Million
Pig:14.6 nTPM
Mouse:33.8 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.8
Sample id Sample description nTPM
Hippocampus
nTPM: 22.9
2529 Female, age 94, left hemisphere 25.3
2148 Female, age 91, left hemisphere 23.4
1898 Male, age 80, left hemisphere 22.4
1911 Female, age 85, right hemisphere 22.3
2621 Female, age 67, right hemisphere 22.3
1855 Male, age 76, left hemisphere 21.7
Dentate gyrus
nTPM: 23.4
2010 Male, age 76, both hemispheres 25.2
2531 Female, age 67, both hemispheres 24.2
2530 Female, age 94, left hemisphere 23.7
1927 Female, age 91, both hemispheres 22.8
2246 Female, age 85, both hemispheres 22.4
2528 Male, age 74, both hemispheres 22.2
Entorhinal gyrus
nTPM: 22.9
1787 Male, age 76, left hemisphere 24.8
2764 Male, age 80, right hemisphere 24.7
2117 Female, age 91, right hemisphere 23.0
2613 Female, age 94, left hemisphere 22.2
2686 Male, age 75, right hemisphere 21.7
1938 Female, age 85, left hemisphere 21.3
Hippocampus, CA1
nTPM: 23.1
1873 Female, age 85, both hemispheres 24.2
2045 Male, age 76, both hemispheres 23.6
2749 Male, age 80, left hemisphere 22.8
2527 Male, age 74, both hemispheres 22.5
2082 Female, age 91, right hemisphere 22.3
Hippocampus, CA2
nTPM: 22.4
2249 Male, age 74, both hemispheres 23.9
1963 Male, age 80, left hemisphere 23.1
2437 Female, age 94, left hemisphere 22.8
1892 Male, age 76, both hemispheres 22.5
1940 Female, age 85, left hemisphere 21.0
2113 Female, age 91, right hemisphere 21.0
Hippocampus, CA3
nTPM: 23.5
2620 Female, age 94, left hemisphere 26.4
2861 Female, age 67, both hemispheres 25.4
2137 Male, age 80, left hemisphere 22.6
1891 Female, age 85, both hemispheres 22.4
2436 Male, age 74, both hemispheres 22.3
1867 Male, age 76, both hemispheres 21.8
Parahippocampal cortex
nTPM: 21.9
1990 Female, age 91, right hemisphere 23.3
2692 Male, age 74, both hemispheres 22.7
1933 Female, age 85, both hemispheres 22.6
2250 Female, age 67, right hemisphere 22.6
2532 Female, age 72, left hemisphere 22.6
2018 Male, age 76, both hemispheres 22.5
2622 Female, age 67, right hemisphere 21.5
2693 Female, age 94, both hemispheres 20.5
2245 Female, age 91, both hemispheres 20.4
1850 Male, age 80, both hemispheres 20.1
Perirhinal gyrus
nTPM: 21.4
1841 Female, age 85, right hemisphere 22.3
1847 Female, age 91, left hemisphere 22.2
2848 Male, age 76, right hemisphere 21.1
1794 Male, age 80, right hemisphere 20.9
2521 Female, age 94, right hemisphere 20.5
Subiculum
nTPM: 23.8
2042 Male, age 76, both hemispheres 25.3
2438 Female, age 94, left hemisphere 24.6
1901 Male, age 80, both hemispheres 24.0
1977 Female, age 85, both hemispheres 23.4
2619 Male, age 74, both hemispheres 23.4
2729 Female, age 91, right hemisphere 22.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.9
Samples: 197

Max nTPM: 43.8
Min nTPM: 16.4
Std nTPM: 5.1
Median nTPM: 27.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 43.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 41.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 40.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 40.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 38.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 38.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 37.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 37.1
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 37.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 37.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 36.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.0
FF:10169-103B7 60 years, female 43.9
FF:10153-102I9 76 years, female 36.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 17.5
Min nTPM: 10.8
Sample A Female 17.5
Sample B Female 13.8
Sample C Male 14.1
Sample D Male 10.8
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 13.5
Min nTPM: 10.7
Sample A Female 13.4
Sample B Female 13.5
Sample C Male 12.7
Sample D Male 10.7
Subiculum
nTPM: 13.7
Samples: 4

Max nTPM: 16.9
Min nTPM: 12.2
Sample A Female 16.9
Sample B Female 13.3
Sample C Male 12.2
Sample D Male 12.5
Ventral hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 18.9
Min nTPM: 10.0
Sample A Female 15.7
Sample B Female 10.0
Sample C Male 18.9
Sample D Male 13.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.9
Samples: 4

Max nTPM: 38.2
Min nTPM: 31.7
Sample A Male 32.4
Sample B Male 38.2
Sample C Female 31.7
Sample D Female 33.1
Hippocampal formation
nTPM: 33.7
Samples: 4

Max nTPM: 36.5
Min nTPM: 31.7
Sample A Male 34.0
Sample B Male 36.5
Sample C Female 32.6
Sample D Female 31.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
77620443 Antisense, RP_070129_03_C09, Mouse strain C57BL/6J (56 days, male) 3.3

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