HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:31.5 nTPM
HPA:31.5 nTPM
GTEx:38.2 nTPM
FANTOM5:88.5 Scaled Tags Per Million
Pig:30.7 nTPM
Mouse:52.1 nTPM
Allen mouse:17.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003890Antibody HPA051519Antibody CAB056157
Glial cells MediumLowMedium
Neuronal cells HighMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.5
Sample id Sample description nTPM
Hippocampus
nTPM: 22.4
1898 Male, age 80, left hemisphere 27.7
2621 Female, age 67, right hemisphere 25.9
2529 Female, age 94, left hemisphere 24.0
1855 Male, age 76, left hemisphere 22.9
2148 Female, age 91, left hemisphere 22.1
1911 Female, age 85, right hemisphere 12.0
Dentate gyrus
nTPM: 20.9
1927 Female, age 91, both hemispheres 25.7
2530 Female, age 94, left hemisphere 24.3
2531 Female, age 67, both hemispheres 20.4
2246 Female, age 85, both hemispheres 20.0
2010 Male, age 76, both hemispheres 18.4
2528 Male, age 74, both hemispheres 16.3
Entorhinal gyrus
nTPM: 25.5
1938 Female, age 85, left hemisphere 28.6
1787 Male, age 76, left hemisphere 27.9
2613 Female, age 94, left hemisphere 26.8
2764 Male, age 80, right hemisphere 26.7
2117 Female, age 91, right hemisphere 22.5
2686 Male, age 75, right hemisphere 20.5
Hippocampus, CA1
nTPM: 21.3
2749 Male, age 80, left hemisphere 29.6
1873 Female, age 85, both hemispheres 22.9
2527 Male, age 74, both hemispheres 19.0
2045 Male, age 76, both hemispheres 18.5
2082 Female, age 91, right hemisphere 16.5
Hippocampus, CA2
nTPM: 22.7
1892 Male, age 76, both hemispheres 28.5
1963 Male, age 80, left hemisphere 27.9
2437 Female, age 94, left hemisphere 24.5
1940 Female, age 85, left hemisphere 20.9
2249 Male, age 74, both hemispheres 18.1
2113 Female, age 91, right hemisphere 16.2
Hippocampus, CA3
nTPM: 21.2
2137 Male, age 80, left hemisphere 24.9
2620 Female, age 94, left hemisphere 23.6
1867 Male, age 76, both hemispheres 23.1
2861 Female, age 67, both hemispheres 21.6
1891 Female, age 85, both hemispheres 17.2
2436 Male, age 74, both hemispheres 16.6
Parahippocampal cortex
nTPM: 23.8
1850 Male, age 80, both hemispheres 32.4
2245 Female, age 91, both hemispheres 28.5
2532 Female, age 72, left hemisphere 25.9
1990 Female, age 91, right hemisphere 24.5
1933 Female, age 85, both hemispheres 24.0
2250 Female, age 67, right hemisphere 23.4
2622 Female, age 67, right hemisphere 20.9
2692 Male, age 74, both hemispheres 20.0
2693 Female, age 94, both hemispheres 19.7
2018 Male, age 76, both hemispheres 18.7
Perirhinal gyrus
nTPM: 31.5
1847 Female, age 91, left hemisphere 40.8
1794 Male, age 80, right hemisphere 31.1
1841 Female, age 85, right hemisphere 30.2
2848 Male, age 76, right hemisphere 29.2
2521 Female, age 94, right hemisphere 26.3
Subiculum
nTPM: 21.2
2438 Female, age 94, left hemisphere 27.7
1977 Female, age 85, both hemispheres 24.8
2619 Male, age 74, both hemispheres 23.3
1901 Male, age 80, both hemispheres 21.3
2729 Female, age 91, right hemisphere 15.8
2042 Male, age 76, both hemispheres 14.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.2
Samples: 197

Max nTPM: 70.7
Min nTPM: 26.8
Std nTPM: 6.1
Median nTPM: 36.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 70.7
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 57.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 54.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 53.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 53.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 52.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 52.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 52.5
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 51.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 51.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 51.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.5
FF:10169-103B7 60 years, female 89.9
FF:10153-102I9 76 years, female 87.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 29.2
Min nTPM: 22.3
Sample A Female 29.2
Sample B Female 28.0
Sample C Male 24.2
Sample D Male 22.3
Entorhinal cortex
nTPM: 30.5
Samples: 4

Max nTPM: 34.7
Min nTPM: 27.2
Sample A Female 34.7
Sample B Female 27.2
Sample C Male 31.5
Sample D Male 28.4
Subiculum
nTPM: 30.8
Samples: 4

Max nTPM: 41.2
Min nTPM: 24.5
Sample A Female 41.2
Sample B Female 26.7
Sample C Male 30.6
Sample D Male 24.5
Ventral hippocampus
nTPM: 29.9
Samples: 4

Max nTPM: 41.1
Min nTPM: 21.8
Sample A Female 31.1
Sample B Female 21.8
Sample C Male 41.1
Sample D Male 25.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.1
Samples: 4

Max nTPM: 61.9
Min nTPM: 46.7
Sample A Male 49.5
Sample B Male 50.4
Sample C Female 46.7
Sample D Female 61.9
Hippocampal formation
nTPM: 40.8
Samples: 4

Max nTPM: 43.9
Min nTPM: 36.4
Sample A Male 36.4
Sample B Male 43.9
Sample C Female 43.4
Sample D Female 39.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.4
68845400 Antisense, RP_050224_01_F12, Mouse strain C57BL/6J (56 days, male) 17.4

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