HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.0 nTPM
HPA:13.0 nTPM
GTEx:12.8 nTPM
FANTOM5:21.5 Scaled Tags Per Million
Pig:3.7 nTPM
Mouse:5.3 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021320
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.0
Sample id Sample description nTPM
Hippocampus
nTPM: 11.0
1855 Male, age 76, left hemisphere 13.2
1898 Male, age 80, left hemisphere 12.5
2148 Female, age 91, left hemisphere 10.7
2529 Female, age 94, left hemisphere 10.4
2621 Female, age 67, right hemisphere 10.0
1911 Female, age 85, right hemisphere 9.1
Dentate gyrus
nTPM: 11.4
2010 Male, age 76, both hemispheres 13.6
2530 Female, age 94, left hemisphere 12.6
2528 Male, age 74, both hemispheres 11.6
1927 Female, age 91, both hemispheres 10.9
2531 Female, age 67, both hemispheres 10.2
2246 Female, age 85, both hemispheres 9.6
Entorhinal gyrus
nTPM: 10.5
2764 Male, age 80, right hemisphere 12.2
2613 Female, age 94, left hemisphere 11.8
1938 Female, age 85, left hemisphere 10.0
1787 Male, age 76, left hemisphere 9.9
2117 Female, age 91, right hemisphere 9.8
2686 Male, age 75, right hemisphere 9.3
Hippocampus, CA1
nTPM: 13.0
2045 Male, age 76, both hemispheres 20.4
2749 Male, age 80, left hemisphere 12.7
2082 Female, age 91, right hemisphere 11.8
1873 Female, age 85, both hemispheres 10.6
2527 Male, age 74, both hemispheres 9.6
Hippocampus, CA2
nTPM: 11.1
1963 Male, age 80, left hemisphere 12.3
2249 Male, age 74, both hemispheres 11.8
1892 Male, age 76, both hemispheres 11.6
2437 Female, age 94, left hemisphere 11.1
1940 Female, age 85, left hemisphere 10.4
2113 Female, age 91, right hemisphere 9.4
Hippocampus, CA3
nTPM: 10.7
2137 Male, age 80, left hemisphere 11.9
2620 Female, age 94, left hemisphere 11.9
1867 Male, age 76, both hemispheres 11.1
2436 Male, age 74, both hemispheres 10.6
2861 Female, age 67, both hemispheres 10.0
1891 Female, age 85, both hemispheres 8.6
Parahippocampal cortex
nTPM: 9.6
1933 Female, age 85, both hemispheres 10.5
1990 Female, age 91, right hemisphere 10.5
2250 Female, age 67, right hemisphere 10.2
2245 Female, age 91, both hemispheres 9.5
2622 Female, age 67, right hemisphere 9.5
1850 Male, age 80, both hemispheres 9.4
2692 Male, age 74, both hemispheres 9.3
2693 Female, age 94, both hemispheres 9.2
2532 Female, age 72, left hemisphere 9.1
2018 Male, age 76, both hemispheres 8.9
Perirhinal gyrus
nTPM: 10.5
2521 Female, age 94, right hemisphere 12.0
1847 Female, age 91, left hemisphere 11.4
1794 Male, age 80, right hemisphere 11.3
1841 Female, age 85, right hemisphere 9.3
2848 Male, age 76, right hemisphere 8.6
Subiculum
nTPM: 9.6
1977 Female, age 85, both hemispheres 10.4
1901 Male, age 80, both hemispheres 10.1
2729 Female, age 91, right hemisphere 9.9
2438 Female, age 94, left hemisphere 9.6
2619 Male, age 74, both hemispheres 9.5
2042 Male, age 76, both hemispheres 8.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.8
Samples: 197

Max nTPM: 27.2
Min nTPM: 2.6
Std nTPM: 3.5
Median nTPM: 12.7
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 27.2
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 25.5
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 23.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 22.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 21.6
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 20.8
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 20.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 20.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 20.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 19.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 19.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.5
FF:10169-103B7 60 years, female 21.9
FF:10153-102I9 76 years, female 21.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.7
Samples: 4

Max nTPM: 4.4
Min nTPM: 3.3
Sample A Female 4.4
Sample B Female 3.4
Sample C Male 3.8
Sample D Male 3.3
Entorhinal cortex
nTPM: 2.8
Samples: 4

Max nTPM: 3.0
Min nTPM: 2.5
Sample A Female 3.0
Sample B Female 2.8
Sample C Male 2.7
Sample D Male 2.5
Subiculum
nTPM: 3.1
Samples: 4

Max nTPM: 3.5
Min nTPM: 2.6
Sample A Female 3.5
Sample B Female 2.8
Sample C Male 3.4
Sample D Male 2.6
Ventral hippocampus
nTPM: 3.5
Samples: 4

Max nTPM: 4.6
Min nTPM: 2.5
Sample A Female 3.6
Sample B Female 2.5
Sample C Male 4.6
Sample D Male 3.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.7
Samples: 4

Max nTPM: 5.3
Min nTPM: 4.0
Sample A Male 4.4
Sample B Male 5.3
Sample C Female 5.2
Sample D Female 4.0
Hippocampal formation
nTPM: 5.4
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.6
Sample A Male 5.6
Sample B Male 4.7
Sample C Female 4.6
Sample D Female 6.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
69838515 Antisense, RP_050309_01_H08, Mouse strain C57BL/6J (56 days, male) 1.6

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