HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.2 nTPM
HPA:27.2 nTPM
GTEx:48.2 nTPM
FANTOM5:70.4 Scaled Tags Per Million
Pig:67.8 nTPM
Mouse:151.2 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053905Antibody HPA062723
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.2
Sample id Sample description nTPM
Hippocampus
nTPM: 27.1
1855 Male, age 76, left hemisphere 33.6
1898 Male, age 80, left hemisphere 32.3
1911 Female, age 85, right hemisphere 25.4
2148 Female, age 91, left hemisphere 24.9
2529 Female, age 94, left hemisphere 23.8
2621 Female, age 67, right hemisphere 22.6
Dentate gyrus
nTPM: 25.7
2530 Female, age 94, left hemisphere 37.5
2010 Male, age 76, both hemispheres 29.7
2528 Male, age 74, both hemispheres 25.5
2246 Female, age 85, both hemispheres 22.9
1927 Female, age 91, both hemispheres 20.0
2531 Female, age 67, both hemispheres 19.0
Entorhinal gyrus
nTPM: 27.2
2117 Female, age 91, right hemisphere 40.4
1938 Female, age 85, left hemisphere 28.4
2764 Male, age 80, right hemisphere 26.6
2686 Male, age 75, right hemisphere 24.7
1787 Male, age 76, left hemisphere 22.5
2613 Female, age 94, left hemisphere 20.5
Hippocampus, CA1
nTPM: 24.5
2749 Male, age 80, left hemisphere 27.5
2527 Male, age 74, both hemispheres 24.6
1873 Female, age 85, both hemispheres 24.3
2045 Male, age 76, both hemispheres 23.4
2082 Female, age 91, right hemisphere 22.9
Hippocampus, CA2
nTPM: 25.2
1892 Male, age 76, both hemispheres 28.7
1963 Male, age 80, left hemisphere 27.5
2249 Male, age 74, both hemispheres 26.2
2113 Female, age 91, right hemisphere 24.4
2437 Female, age 94, left hemisphere 22.9
1940 Female, age 85, left hemisphere 21.7
Hippocampus, CA3
nTPM: 24.2
1867 Male, age 76, both hemispheres 29.5
2436 Male, age 74, both hemispheres 27.2
1891 Female, age 85, both hemispheres 25.5
2861 Female, age 67, both hemispheres 24.4
2137 Male, age 80, left hemisphere 19.8
2620 Female, age 94, left hemisphere 19.0
Parahippocampal cortex
nTPM: 23.4
2692 Male, age 74, both hemispheres 29.7
1933 Female, age 85, both hemispheres 28.7
1850 Male, age 80, both hemispheres 24.9
1990 Female, age 91, right hemisphere 22.7
2018 Male, age 76, both hemispheres 22.4
2622 Female, age 67, right hemisphere 22.4
2532 Female, age 72, left hemisphere 21.8
2245 Female, age 91, both hemispheres 20.7
2693 Female, age 94, both hemispheres 20.4
2250 Female, age 67, right hemisphere 20.2
Perirhinal gyrus
nTPM: 21.8
1794 Male, age 80, right hemisphere 24.4
2848 Male, age 76, right hemisphere 23.2
1847 Female, age 91, left hemisphere 22.2
1841 Female, age 85, right hemisphere 19.7
2521 Female, age 94, right hemisphere 19.2
Subiculum
nTPM: 25.3
2042 Male, age 76, both hemispheres 29.2
1901 Male, age 80, both hemispheres 28.4
1977 Female, age 85, both hemispheres 26.9
2729 Female, age 91, right hemisphere 26.1
2619 Male, age 74, both hemispheres 24.9
2438 Female, age 94, left hemisphere 16.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.2
Samples: 197

Max nTPM: 80.8
Min nTPM: 18.2
Std nTPM: 10.7
Median nTPM: 48.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 80.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 80.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 77.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 75.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 72.9
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 72.5
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 69.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 68.7
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 66.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 65.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 65.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.4
FF:10153-102I9 76 years, female 84.4
FF:10169-103B7 60 years, female 56.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 67.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 67.9
Samples: 4

Max nTPM: 89.2
Min nTPM: 48.0
Sample A Female 89.2
Sample B Female 68.0
Sample C Male 66.2
Sample D Male 48.0
Entorhinal cortex
nTPM: 58.9
Samples: 4

Max nTPM: 66.0
Min nTPM: 48.6
Sample A Female 55.6
Sample B Female 66.0
Sample C Male 65.3
Sample D Male 48.6
Subiculum
nTPM: 59.1
Samples: 4

Max nTPM: 72.8
Min nTPM: 52.0
Sample A Female 72.8
Sample B Female 56.4
Sample C Male 52.0
Sample D Male 55.2
Ventral hippocampus
nTPM: 65.8
Samples: 4

Max nTPM: 81.5
Min nTPM: 48.1
Sample A Female 67.4
Sample B Female 48.1
Sample C Male 81.5
Sample D Male 66.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 151.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 133.3
Samples: 4

Max nTPM: 139.6
Min nTPM: 126.6
Sample A Male 134.0
Sample B Male 126.6
Sample C Female 132.8
Sample D Female 139.6
Hippocampal formation
nTPM: 151.2
Samples: 4

Max nTPM: 164.2
Min nTPM: 136.0
Sample A Male 136.0
Sample B Male 140.8
Sample C Female 163.6
Sample D Female 164.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71486931 Antisense, RP_050913_01_A02, Mouse strain C57BL/6J (56 days, male) 0.4

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