HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:44.5 nTPM
HPA:44.5 nTPM
GTEx:56.3 nTPM
FANTOM5:110.1 Scaled Tags Per Million
Pig:45.8 nTPM
Mouse:63.4 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053730Antibody HPA058604
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.5
Sample id Sample description nTPM
Hippocampus
nTPM: 43.8
1898 Male, age 80, left hemisphere 51.9
1855 Male, age 76, left hemisphere 47.5
2621 Female, age 67, right hemisphere 42.5
2529 Female, age 94, left hemisphere 41.8
1911 Female, age 85, right hemisphere 40.7
2148 Female, age 91, left hemisphere 38.7
Dentate gyrus
nTPM: 44.0
2530 Female, age 94, left hemisphere 52.5
2010 Male, age 76, both hemispheres 48.2
1927 Female, age 91, both hemispheres 44.6
2246 Female, age 85, both hemispheres 41.1
2528 Male, age 74, both hemispheres 38.9
2531 Female, age 67, both hemispheres 38.4
Entorhinal gyrus
nTPM: 40.8
1938 Female, age 85, left hemisphere 43.8
1787 Male, age 76, left hemisphere 42.8
2686 Male, age 75, right hemisphere 42.5
2117 Female, age 91, right hemisphere 40.9
2613 Female, age 94, left hemisphere 38.1
2764 Male, age 80, right hemisphere 36.5
Hippocampus, CA1
nTPM: 43.2
2749 Male, age 80, left hemisphere 48.3
1873 Female, age 85, both hemispheres 47.5
2527 Male, age 74, both hemispheres 41.4
2045 Male, age 76, both hemispheres 40.7
2082 Female, age 91, right hemisphere 38.0
Hippocampus, CA2
nTPM: 44.5
1892 Male, age 76, both hemispheres 51.7
1963 Male, age 80, left hemisphere 50.4
2437 Female, age 94, left hemisphere 42.4
2249 Male, age 74, both hemispheres 42.2
1940 Female, age 85, left hemisphere 41.2
2113 Female, age 91, right hemisphere 39.3
Hippocampus, CA3
nTPM: 40.8
1867 Male, age 76, both hemispheres 45.2
1891 Female, age 85, both hemispheres 44.4
2137 Male, age 80, left hemisphere 43.1
2436 Male, age 74, both hemispheres 39.9
2861 Female, age 67, both hemispheres 38.1
2620 Female, age 94, left hemisphere 34.4
Parahippocampal cortex
nTPM: 41.7
1850 Male, age 80, both hemispheres 47.1
1933 Female, age 85, both hemispheres 43.9
2692 Male, age 74, both hemispheres 43.6
1990 Female, age 91, right hemisphere 42.8
2250 Female, age 67, right hemisphere 42.3
2245 Female, age 91, both hemispheres 40.5
2693 Female, age 94, both hemispheres 40.2
2532 Female, age 72, left hemisphere 40.1
2018 Male, age 76, both hemispheres 38.9
2622 Female, age 67, right hemisphere 37.5
Perirhinal gyrus
nTPM: 41.7
1841 Female, age 85, right hemisphere 43.6
1847 Female, age 91, left hemisphere 42.9
1794 Male, age 80, right hemisphere 42.0
2848 Male, age 76, right hemisphere 41.2
2521 Female, age 94, right hemisphere 38.8
Subiculum
nTPM: 41.6
1901 Male, age 80, both hemispheres 43.8
2438 Female, age 94, left hemisphere 43.3
2042 Male, age 76, both hemispheres 42.7
1977 Female, age 85, both hemispheres 41.7
2729 Female, age 91, right hemisphere 39.8
2619 Male, age 74, both hemispheres 38.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.3
Samples: 197

Max nTPM: 113.1
Min nTPM: 23.9
Std nTPM: 13.7
Median nTPM: 54.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 113.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 111.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 102.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 98.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 96.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 92.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 92.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 89.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 88.6
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 84.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 81.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 110.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 110.1
FF:10169-103B7 60 years, female 129.7
FF:10153-102I9 76 years, female 90.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.8
Samples: 4

Max nTPM: 58.7
Min nTPM: 31.5
Sample A Female 58.7
Sample B Female 40.3
Sample C Male 52.7
Sample D Male 31.5
Entorhinal cortex
nTPM: 41.9
Samples: 4

Max nTPM: 50.7
Min nTPM: 34.1
Sample A Female 40.6
Sample B Female 50.7
Sample C Male 42.2
Sample D Male 34.1
Subiculum
nTPM: 43.3
Samples: 4

Max nTPM: 54.0
Min nTPM: 39.0
Sample A Female 54.0
Sample B Female 39.3
Sample C Male 40.8
Sample D Male 39.0
Ventral hippocampus
nTPM: 40.9
Samples: 4

Max nTPM: 46.8
Min nTPM: 33.0
Sample A Female 46.8
Sample B Female 33.0
Sample C Male 45.5
Sample D Male 38.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.4
Samples: 4

Max nTPM: 65.8
Min nTPM: 59.2
Sample A Male 59.2
Sample B Male 65.8
Sample C Female 63.7
Sample D Female 64.7
Hippocampal formation
nTPM: 57.1
Samples: 4

Max nTPM: 66.5
Min nTPM: 52.6
Sample A Male 66.5
Sample B Male 52.6
Sample C Female 54.5
Sample D Female 54.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
67765697 Antisense, RP_040916_01_C10, Mouse strain C57BL/6J (56 days, male) 0.2

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