HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:45.2 nTPM
HPA:45.2 nTPM
GTEx:38.2 nTPM
FANTOM5:143.3 Scaled Tags Per Million
Pig:60.7 nTPM
Mouse:34.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051293
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.2
Sample id Sample description nTPM
Hippocampus
nTPM: 45.2
2621 Female, age 67, right hemisphere 57.9
1855 Male, age 76, left hemisphere 48.0
1898 Male, age 80, left hemisphere 46.5
1911 Female, age 85, right hemisphere 41.7
2148 Female, age 91, left hemisphere 38.8
2529 Female, age 94, left hemisphere 38.3
Dentate gyrus
nTPM: 40.4
2010 Male, age 76, both hemispheres 47.7
2531 Female, age 67, both hemispheres 39.9
2246 Female, age 85, both hemispheres 39.7
2528 Male, age 74, both hemispheres 39.0
2530 Female, age 94, left hemisphere 38.2
1927 Female, age 91, both hemispheres 38.0
Entorhinal gyrus
nTPM: 39.4
2117 Female, age 91, right hemisphere 48.9
1787 Male, age 76, left hemisphere 43.9
2613 Female, age 94, left hemisphere 38.3
1938 Female, age 85, left hemisphere 35.9
2764 Male, age 80, right hemisphere 35.6
2686 Male, age 75, right hemisphere 33.8
Hippocampus, CA1
nTPM: 39.2
2045 Male, age 76, both hemispheres 44.9
2082 Female, age 91, right hemisphere 41.4
1873 Female, age 85, both hemispheres 38.7
2527 Male, age 74, both hemispheres 36.4
2749 Male, age 80, left hemisphere 34.5
Hippocampus, CA2
nTPM: 43.0
1940 Female, age 85, left hemisphere 56.1
2437 Female, age 94, left hemisphere 43.5
1892 Male, age 76, both hemispheres 42.2
2113 Female, age 91, right hemisphere 42.2
1963 Male, age 80, left hemisphere 39.6
2249 Male, age 74, both hemispheres 34.6
Hippocampus, CA3
nTPM: 38.1
1867 Male, age 76, both hemispheres 46.4
2861 Female, age 67, both hemispheres 40.8
1891 Female, age 85, both hemispheres 39.2
2436 Male, age 74, both hemispheres 36.1
2137 Male, age 80, left hemisphere 35.5
2620 Female, age 94, left hemisphere 30.5
Parahippocampal cortex
nTPM: 40.2
2250 Female, age 67, right hemisphere 59.9
2018 Male, age 76, both hemispheres 51.5
2693 Female, age 94, both hemispheres 40.8
1990 Female, age 91, right hemisphere 36.9
2532 Female, age 72, left hemisphere 36.9
1850 Male, age 80, both hemispheres 36.4
2245 Female, age 91, both hemispheres 36.3
2692 Male, age 74, both hemispheres 35.4
1933 Female, age 85, both hemispheres 34.1
2622 Female, age 67, right hemisphere 33.5
Perirhinal gyrus
nTPM: 38.4
2521 Female, age 94, right hemisphere 44.4
1841 Female, age 85, right hemisphere 37.8
1794 Male, age 80, right hemisphere 37.3
2848 Male, age 76, right hemisphere 37.1
1847 Female, age 91, left hemisphere 35.4
Subiculum
nTPM: 41.7
2042 Male, age 76, both hemispheres 52.2
2729 Female, age 91, right hemisphere 46.8
1901 Male, age 80, both hemispheres 39.5
2619 Male, age 74, both hemispheres 39.4
2438 Female, age 94, left hemisphere 36.9
1977 Female, age 85, both hemispheres 35.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.2
Samples: 197

Max nTPM: 257.6
Min nTPM: 4.4
Std nTPM: 35.8
Median nTPM: 27.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 257.6
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 227.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 159.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 159.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 156.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 127.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 122.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 111.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 108.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 101.5
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 101.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 143.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 143.3
FF:10169-103B7 60 years, female 150.6
FF:10153-102I9 76 years, female 136.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.7
Samples: 4

Max nTPM: 76.6
Min nTPM: 43.0
Sample A Female 76.6
Sample B Female 55.0
Sample C Male 68.0
Sample D Male 43.0
Entorhinal cortex
nTPM: 39.0
Samples: 4

Max nTPM: 46.9
Min nTPM: 29.0
Sample A Female 38.8
Sample B Female 46.9
Sample C Male 41.3
Sample D Male 29.0
Subiculum
nTPM: 59.1
Samples: 4

Max nTPM: 76.4
Min nTPM: 41.6
Sample A Female 76.4
Sample B Female 65.8
Sample C Male 41.6
Sample D Male 52.4
Ventral hippocampus
nTPM: 56.2
Samples: 4

Max nTPM: 57.3
Min nTPM: 55.4
Sample A Female 55.4
Sample B Female 56.8
Sample C Male 57.3
Sample D Male 55.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.8
Samples: 4

Max nTPM: 40.6
Min nTPM: 28.5
Sample A Male 33.3
Sample B Male 28.5
Sample C Female 36.7
Sample D Female 40.6
Hippocampal formation
nTPM: 33.0
Samples: 4

Max nTPM: 39.0
Min nTPM: 28.8
Sample A Male 39.0
Sample B Male 30.8
Sample C Female 28.8
Sample D Female 33.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
100145372 Antisense, RP_110519_02_F11, Mouse strain C57BL/6J (56 days, male) 0.1

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