COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: High
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:82.2 nTPM
HPA:82.2 nTPM
GTEx:48.9 nTPM
FANTOM5:136.9 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA051293
Endothelial cells Not detected
Glandular cells High
Peripheral nerve/ganglion Not detected



COLON - HPA RNA-seqi
Average nTPM 82.2
overview
Male, age 54 		Colon sample 67
nTPM: 43.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 89.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 43.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 21.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 198.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 56.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 87.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 98.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 96.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 81.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 96.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 73
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 83
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 48.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 28.6
Samples: 373

Max nTPM: 181.5
Min nTPM: 5.5
Std nTPM: 18.5
Median nTPM: 23.7
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 181.5
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 101.0
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 90.9
GTEX-1AMEY-1826-SM-72D5L 30-39 years, female 83.7
GTEX-1RLM8-1726-SM-E9TKF 50-59 years, male 83.1
GTEX-1J1R8-1426-SM-CL55O 40-49 years, male 81.7
GTEX-15UF6-2726-SM-7KULY 70-79 years, female 77.5
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 76.2
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 73.1
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 73.0
GTEX-1LSVX-2026-SM-E9TJD 60-69 years, male 69.7
Show allShow less
Colon - Transverse
Average nTPM: 48.9
Samples: 406

Max nTPM: 186.5
Min nTPM: 8.7
Std nTPM: 29.5
Median nTPM: 40.4
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 186.5
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 174.7
GTEX-1HSMQ-2726-SM-C1YRE 50-59 years, male 153.6
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 150.3
GTEX-1IDJD-2226-SM-A96TD 30-39 years, male 150.2
GTEX-1QCLZ-1926-SM-E6CR3 60-69 years, female 140.9
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 139.7
GTEX-14ICK-1026-SM-6AJA4 40-49 years, male 131.5
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 126.7
GTEX-1PIGE-1426-SM-E9U61 20-29 years, male 122.0
GTEX-144GL-2526-SM-5TDDL 50-59 years, male 118.3
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 136.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 136.9
FF:10014-101C5 62,83,84 years, mixed 136.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.