HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:56.8 nTPM
HPA:56.8 nTPM
GTEx:45.2 nTPM
FANTOM5:80.5 Scaled Tags Per Million
Pig:37.0 nTPM
Mouse:56.5 nTPM
Allen mouse:11.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA070478
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.8
Sample id Sample description nTPM
Hippocampus
nTPM: 43.2
1898 Male, age 80, left hemisphere 51.2
2621 Female, age 67, right hemisphere 45.3
2148 Female, age 91, left hemisphere 43.9
1855 Male, age 76, left hemisphere 41.7
1911 Female, age 85, right hemisphere 39.3
2529 Female, age 94, left hemisphere 37.8
Dentate gyrus
nTPM: 46.5
2531 Female, age 67, both hemispheres 56.2
2530 Female, age 94, left hemisphere 52.4
2010 Male, age 76, both hemispheres 44.1
2246 Female, age 85, both hemispheres 43.3
1927 Female, age 91, both hemispheres 41.5
2528 Male, age 74, both hemispheres 41.4
Entorhinal gyrus
nTPM: 56.8
2764 Male, age 80, right hemisphere 66.0
2613 Female, age 94, left hemisphere 63.8
1787 Male, age 76, left hemisphere 58.4
2686 Male, age 75, right hemisphere 56.7
1938 Female, age 85, left hemisphere 55.4
2117 Female, age 91, right hemisphere 40.5
Hippocampus, CA1
nTPM: 44.5
2749 Male, age 80, left hemisphere 52.1
2045 Male, age 76, both hemispheres 51.1
1873 Female, age 85, both hemispheres 45.0
2527 Male, age 74, both hemispheres 38.2
2082 Female, age 91, right hemisphere 36.0
Hippocampus, CA2
nTPM: 42.9
1892 Male, age 76, both hemispheres 51.2
1963 Male, age 80, left hemisphere 47.0
2437 Female, age 94, left hemisphere 46.9
1940 Female, age 85, left hemisphere 40.2
2249 Male, age 74, both hemispheres 36.3
2113 Female, age 91, right hemisphere 35.9
Hippocampus, CA3
nTPM: 47.4
2620 Female, age 94, left hemisphere 63.3
2861 Female, age 67, both hemispheres 51.0
2137 Male, age 80, left hemisphere 49.4
1891 Female, age 85, both hemispheres 44.2
1867 Male, age 76, both hemispheres 43.8
2436 Male, age 74, both hemispheres 32.7
Parahippocampal cortex
nTPM: 49.4
1850 Male, age 80, both hemispheres 56.0
2532 Female, age 72, left hemisphere 54.6
2622 Female, age 67, right hemisphere 53.8
1933 Female, age 85, both hemispheres 53.2
2693 Female, age 94, both hemispheres 49.0
1990 Female, age 91, right hemisphere 48.6
2245 Female, age 91, both hemispheres 47.4
2692 Male, age 74, both hemispheres 46.4
2018 Male, age 76, both hemispheres 43.4
2250 Female, age 67, right hemisphere 41.7
Perirhinal gyrus
nTPM: 54.3
1794 Male, age 80, right hemisphere 59.2
2848 Male, age 76, right hemisphere 58.5
2521 Female, age 94, right hemisphere 52.1
1841 Female, age 85, right hemisphere 51.0
1847 Female, age 91, left hemisphere 50.8
Subiculum
nTPM: 44.1
1977 Female, age 85, both hemispheres 52.8
1901 Male, age 80, both hemispheres 47.7
2619 Male, age 74, both hemispheres 42.1
2438 Female, age 94, left hemisphere 41.7
2042 Male, age 76, both hemispheres 41.1
2729 Female, age 91, right hemisphere 39.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.2
Samples: 197

Max nTPM: 168.7
Min nTPM: 5.6
Std nTPM: 18.8
Median nTPM: 41.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 168.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 128.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 102.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 94.5
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 87.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 81.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 78.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 77.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 75.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 74.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 74.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.5
FF:10169-103B7 60 years, female 91.0
FF:10153-102I9 76 years, female 70.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 19.8
Min nTPM: 17.4
Sample A Female 17.4
Sample B Female 19.1
Sample C Male 19.8
Sample D Male 18.2
Entorhinal cortex
nTPM: 37.0
Samples: 4

Max nTPM: 40.6
Min nTPM: 32.4
Sample A Female 40.6
Sample B Female 32.4
Sample C Male 37.9
Sample D Male 37.1
Subiculum
nTPM: 24.7
Samples: 4

Max nTPM: 29.3
Min nTPM: 19.6
Sample A Female 29.3
Sample B Female 21.4
Sample C Male 28.5
Sample D Male 19.6
Ventral hippocampus
nTPM: 20.1
Samples: 4

Max nTPM: 23.4
Min nTPM: 15.7
Sample A Female 15.7
Sample B Female 20.0
Sample C Male 23.4
Sample D Male 21.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.5
Samples: 4

Max nTPM: 68.6
Min nTPM: 46.3
Sample A Male 62.9
Sample B Male 68.6
Sample C Female 46.3
Sample D Female 48.0
Hippocampal formation
nTPM: 26.7
Samples: 4

Max nTPM: 31.0
Min nTPM: 18.5
Sample A Male 31.0
Sample B Male 28.3
Sample C Female 18.5
Sample D Female 28.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.5
72119580 Antisense, RP_051017_04_A03, Mouse strain C57BL/6J (56 days, male) 15.4
69201558 Antisense, RP_050317_03_B07, Mouse strain C57BL/6J (56 days, male) 13.4
73512202 Antisense, RP_050713_01_E08, Mouse strain C57BL/6J (56 days, male) 5.6
70919537 Antisense, RP_050713_01_E08, Mouse strain C57BL/6J (56 days, male) 5.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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