HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:68.4 nTPM
HPA:68.4 nTPM
GTEx:63.0 nTPM
FANTOM5:78.2 Scaled Tags Per Million
Pig:97.3 nTPM
Mouse:56.5 nTPM
Allen mouse:3.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043761
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.4
Sample id Sample description nTPM
Hippocampus
nTPM: 66.3
1898 Male, age 80, left hemisphere 70.4
2621 Female, age 67, right hemisphere 67.9
1855 Male, age 76, left hemisphere 66.0
2529 Female, age 94, left hemisphere 65.5
1911 Female, age 85, right hemisphere 65.0
2148 Female, age 91, left hemisphere 62.9
Dentate gyrus
nTPM: 65.5
2010 Male, age 76, both hemispheres 67.9
1927 Female, age 91, both hemispheres 67.5
2528 Male, age 74, both hemispheres 66.0
2530 Female, age 94, left hemisphere 64.8
2246 Female, age 85, both hemispheres 64.4
2531 Female, age 67, both hemispheres 62.5
Entorhinal gyrus
nTPM: 65.1
1787 Male, age 76, left hemisphere 67.3
1938 Female, age 85, left hemisphere 66.9
2764 Male, age 80, right hemisphere 66.6
2117 Female, age 91, right hemisphere 65.9
2613 Female, age 94, left hemisphere 62.4
2686 Male, age 75, right hemisphere 61.2
Hippocampus, CA1
nTPM: 65.2
2749 Male, age 80, left hemisphere 68.2
1873 Female, age 85, both hemispheres 65.4
2527 Male, age 74, both hemispheres 65.0
2082 Female, age 91, right hemisphere 64.4
2045 Male, age 76, both hemispheres 63.2
Hippocampus, CA2
nTPM: 67.2
2249 Male, age 74, both hemispheres 72.2
1892 Male, age 76, both hemispheres 67.9
1963 Male, age 80, left hemisphere 67.8
1940 Female, age 85, left hemisphere 66.1
2113 Female, age 91, right hemisphere 65.5
2437 Female, age 94, left hemisphere 63.3
Hippocampus, CA3
nTPM: 64.7
2436 Male, age 74, both hemispheres 67.8
1867 Male, age 76, both hemispheres 67.4
1891 Female, age 85, both hemispheres 66.9
2137 Male, age 80, left hemisphere 65.6
2620 Female, age 94, left hemisphere 62.5
2861 Female, age 67, both hemispheres 57.8
Parahippocampal cortex
nTPM: 65.7
1850 Male, age 80, both hemispheres 70.2
1990 Female, age 91, right hemisphere 69.0
1933 Female, age 85, both hemispheres 68.2
2693 Female, age 94, both hemispheres 66.9
2250 Female, age 67, right hemisphere 66.3
2018 Male, age 76, both hemispheres 66.1
2245 Female, age 91, both hemispheres 64.9
2692 Male, age 74, both hemispheres 63.0
2532 Female, age 72, left hemisphere 62.9
2622 Female, age 67, right hemisphere 59.1
Perirhinal gyrus
nTPM: 68.4
1847 Female, age 91, left hemisphere 70.3
1794 Male, age 80, right hemisphere 70.2
1841 Female, age 85, right hemisphere 68.9
2521 Female, age 94, right hemisphere 66.5
2848 Male, age 76, right hemisphere 66.0
Subiculum
nTPM: 64.5
1977 Female, age 85, both hemispheres 67.4
1901 Male, age 80, both hemispheres 67.2
2042 Male, age 76, both hemispheres 64.4
2729 Female, age 91, right hemisphere 63.0
2619 Male, age 74, both hemispheres 62.7
2438 Female, age 94, left hemisphere 62.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.0
Samples: 197

Max nTPM: 178.8
Min nTPM: 38.9
Std nTPM: 14.6
Median nTPM: 61.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 178.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 108.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 102.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 99.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 94.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 92.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 90.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 90.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 90.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 88.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 86.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.2
FF:10169-103B7 60 years, female 84.7
FF:10153-102I9 76 years, female 71.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 97.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 97.3
Samples: 4

Max nTPM: 133.5
Min nTPM: 67.6
Sample A Female 133.5
Sample B Female 84.9
Sample C Male 103.0
Sample D Male 67.6
Entorhinal cortex
nTPM: 89.9
Samples: 4

Max nTPM: 98.2
Min nTPM: 76.8
Sample A Female 98.2
Sample B Female 97.1
Sample C Male 87.6
Sample D Male 76.8
Subiculum
nTPM: 84.5
Samples: 4

Max nTPM: 116.0
Min nTPM: 68.7
Sample A Female 116.0
Sample B Female 74.8
Sample C Male 68.7
Sample D Male 78.4
Ventral hippocampus
nTPM: 82.5
Samples: 4

Max nTPM: 94.9
Min nTPM: 67.6
Sample A Female 94.9
Sample B Female 67.6
Sample C Male 75.6
Sample D Male 91.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.9
Samples: 4

Max nTPM: 61.5
Min nTPM: 48.5
Sample A Male 48.5
Sample B Male 55.3
Sample C Female 61.5
Sample D Female 54.2
Hippocampal formation
nTPM: 56.5
Samples: 4

Max nTPM: 67.0
Min nTPM: 51.4
Sample A Male 67.0
Sample B Male 53.6
Sample C Female 51.4
Sample D Female 54.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.2
68269062 Antisense, RP_041208_01_H01, Mouse strain C57BL/6J (56 days, male) 3.2

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