HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:29.6 nTPM
HPA:29.6 nTPM
GTEx:35.4 nTPM
FANTOM5:67.4 Scaled Tags Per Million
Pig:47.6 nTPM
Mouse:36.0 nTPM
Allen mouse:7.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.6
Sample id Sample description nTPM
Hippocampus
nTPM: 25.7
2621 Female, age 67, right hemisphere 37.2
2148 Female, age 91, left hemisphere 31.4
2529 Female, age 94, left hemisphere 26.0
1911 Female, age 85, right hemisphere 22.5
1898 Male, age 80, left hemisphere 20.7
1855 Male, age 76, left hemisphere 16.2
Dentate gyrus
nTPM: 22.5
1927 Female, age 91, both hemispheres 38.7
2531 Female, age 67, both hemispheres 37.8
2528 Male, age 74, both hemispheres 18.4
2246 Female, age 85, both hemispheres 15.2
2530 Female, age 94, left hemisphere 14.7
2010 Male, age 76, both hemispheres 10.2
Entorhinal gyrus
nTPM: 29.6
2613 Female, age 94, left hemisphere 48.9
2686 Male, age 75, right hemisphere 34.1
2764 Male, age 80, right hemisphere 28.5
1938 Female, age 85, left hemisphere 28.3
1787 Male, age 76, left hemisphere 23.1
2117 Female, age 91, right hemisphere 14.6
Hippocampus, CA1
nTPM: 24.2
2749 Male, age 80, left hemisphere 35.1
2527 Male, age 74, both hemispheres 28.1
2045 Male, age 76, both hemispheres 22.4
1873 Female, age 85, both hemispheres 19.3
2082 Female, age 91, right hemisphere 16.1
Hippocampus, CA2
nTPM: 21.5
1963 Male, age 80, left hemisphere 36.8
2437 Female, age 94, left hemisphere 24.3
1892 Male, age 76, both hemispheres 22.6
2113 Female, age 91, right hemisphere 21.8
2249 Male, age 74, both hemispheres 12.4
1940 Female, age 85, left hemisphere 11.2
Hippocampus, CA3
nTPM: 28.9
2861 Female, age 67, both hemispheres 44.6
2137 Male, age 80, left hemisphere 42.6
2620 Female, age 94, left hemisphere 37.4
1867 Male, age 76, both hemispheres 19.9
1891 Female, age 85, both hemispheres 15.3
2436 Male, age 74, both hemispheres 13.9
Parahippocampal cortex
nTPM: 25.9
2245 Female, age 91, both hemispheres 38.5
2622 Female, age 67, right hemisphere 34.4
2693 Female, age 94, both hemispheres 28.0
2250 Female, age 67, right hemisphere 26.1
1933 Female, age 85, both hemispheres 26.0
1990 Female, age 91, right hemisphere 24.6
1850 Male, age 80, both hemispheres 23.3
2532 Female, age 72, left hemisphere 20.8
2692 Male, age 74, both hemispheres 20.1
2018 Male, age 76, both hemispheres 16.9
Perirhinal gyrus
nTPM: 29.5
1847 Female, age 91, left hemisphere 39.8
2521 Female, age 94, right hemisphere 32.3
1794 Male, age 80, right hemisphere 28.1
1841 Female, age 85, right hemisphere 25.6
2848 Male, age 76, right hemisphere 21.8
Subiculum
nTPM: 16.5
2619 Male, age 74, both hemispheres 22.7
1977 Female, age 85, both hemispheres 20.2
1901 Male, age 80, both hemispheres 18.3
2729 Female, age 91, right hemisphere 16.1
2438 Female, age 94, left hemisphere 13.5
2042 Male, age 76, both hemispheres 8.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.4
Samples: 197

Max nTPM: 113.9
Min nTPM: 1.8
Std nTPM: 21.5
Median nTPM: 33.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 113.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 103.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 100.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 100.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 90.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 83.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 83.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 80.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 79.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 73.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 70.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.4
FF:10153-102I9 76 years, female 68.9
FF:10169-103B7 60 years, female 65.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.3
Samples: 4

Max nTPM: 33.6
Min nTPM: 25.2
Sample A Female 32.7
Sample B Female 33.6
Sample C Male 25.2
Sample D Male 25.8
Entorhinal cortex
nTPM: 47.6
Samples: 4

Max nTPM: 56.2
Min nTPM: 42.3
Sample A Female 48.9
Sample B Female 43.1
Sample C Male 56.2
Sample D Male 42.3
Subiculum
nTPM: 35.2
Samples: 4

Max nTPM: 47.9
Min nTPM: 26.3
Sample A Female 47.9
Sample B Female 32.1
Sample C Male 34.4
Sample D Male 26.3
Ventral hippocampus
nTPM: 31.7
Samples: 4

Max nTPM: 40.9
Min nTPM: 24.1
Sample A Female 24.1
Sample B Female 26.5
Sample C Male 40.9
Sample D Male 35.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.1
Samples: 4

Max nTPM: 40.8
Min nTPM: 32.3
Sample A Male 34.7
Sample B Male 36.4
Sample C Female 32.3
Sample D Female 40.8
Hippocampal formation
nTPM: 30.4
Samples: 4

Max nTPM: 32.4
Min nTPM: 27.4
Sample A Male 30.3
Sample B Male 32.4
Sample C Female 31.6
Sample D Female 27.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.4
70946252 Antisense, RP_050426_04_G07, Mouse strain C57BL/6J (56 days, male) 7.4

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