HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:36.6 nTPM
HPA:36.6 nTPM
GTEx:29.3 nTPM
FANTOM5:27.0 Scaled Tags Per Million
Pig:29.4 nTPM
Mouse:39.1 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052439
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.6
Sample id Sample description nTPM
Hippocampus
nTPM: 36.6
2621 Female, age 67, right hemisphere 38.8
1855 Male, age 76, left hemisphere 37.4
1898 Male, age 80, left hemisphere 37.3
2529 Female, age 94, left hemisphere 36.5
1911 Female, age 85, right hemisphere 35.0
2148 Female, age 91, left hemisphere 34.9
Dentate gyrus
nTPM: 36.1
2530 Female, age 94, left hemisphere 36.7
2010 Male, age 76, both hemispheres 36.4
1927 Female, age 91, both hemispheres 36.1
2246 Female, age 85, both hemispheres 35.9
2528 Male, age 74, both hemispheres 35.9
2531 Female, age 67, both hemispheres 35.4
Entorhinal gyrus
nTPM: 35.9
1787 Male, age 76, left hemisphere 36.9
2117 Female, age 91, right hemisphere 36.5
2764 Male, age 80, right hemisphere 36.4
1938 Female, age 85, left hemisphere 35.9
2686 Male, age 75, right hemisphere 35.1
2613 Female, age 94, left hemisphere 34.8
Hippocampus, CA1
nTPM: 36.2
2045 Male, age 76, both hemispheres 37.0
2749 Male, age 80, left hemisphere 36.7
1873 Female, age 85, both hemispheres 36.4
2527 Male, age 74, both hemispheres 36.1
2082 Female, age 91, right hemisphere 34.9
Hippocampus, CA2
nTPM: 36.2
1892 Male, age 76, both hemispheres 37.5
1940 Female, age 85, left hemisphere 36.4
1963 Male, age 80, left hemisphere 36.3
2437 Female, age 94, left hemisphere 36.3
2249 Male, age 74, both hemispheres 35.3
2113 Female, age 91, right hemisphere 35.2
Hippocampus, CA3
nTPM: 35.4
1867 Male, age 76, both hemispheres 37.2
1891 Female, age 85, both hemispheres 36.4
2137 Male, age 80, left hemisphere 35.3
2436 Male, age 74, both hemispheres 35.1
2620 Female, age 94, left hemisphere 34.3
2861 Female, age 67, both hemispheres 33.9
Parahippocampal cortex
nTPM: 36.2
2532 Female, age 72, left hemisphere 37.9
2018 Male, age 76, both hemispheres 37.7
2250 Female, age 67, right hemisphere 37.0
2692 Male, age 74, both hemispheres 36.8
1933 Female, age 85, both hemispheres 36.3
1850 Male, age 80, both hemispheres 36.2
2245 Female, age 91, both hemispheres 35.2
2622 Female, age 67, right hemisphere 35.2
1990 Female, age 91, right hemisphere 35.1
2693 Female, age 94, both hemispheres 34.9
Perirhinal gyrus
nTPM: 36.4
1841 Female, age 85, right hemisphere 37.0
1794 Male, age 80, right hemisphere 36.8
1847 Female, age 91, left hemisphere 36.5
2521 Female, age 94, right hemisphere 36.5
2848 Male, age 76, right hemisphere 35.1
Subiculum
nTPM: 36.6
2042 Male, age 76, both hemispheres 37.5
2619 Male, age 74, both hemispheres 37.4
1901 Male, age 80, both hemispheres 37.3
1977 Female, age 85, both hemispheres 36.3
2438 Female, age 94, left hemisphere 35.9
2729 Female, age 91, right hemisphere 35.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.3
Samples: 197

Max nTPM: 61.8
Min nTPM: 14.9
Std nTPM: 7.3
Median nTPM: 28.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 61.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 60.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 54.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 51.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 49.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 44.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 43.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 43.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 43.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 42.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 42.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.0
FF:10153-102I9 76 years, female 33.1
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.4
Samples: 4

Max nTPM: 36.9
Min nTPM: 26.2
Sample A Female 36.9
Sample B Female 27.6
Sample C Male 26.2
Sample D Male 26.9
Entorhinal cortex
nTPM: 24.3
Samples: 4

Max nTPM: 26.8
Min nTPM: 19.4
Sample A Female 26.8
Sample B Female 26.4
Sample C Male 24.7
Sample D Male 19.4
Subiculum
nTPM: 23.5
Samples: 4

Max nTPM: 29.8
Min nTPM: 19.3
Sample A Female 29.8
Sample B Female 23.3
Sample C Male 19.3
Sample D Male 21.4
Ventral hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 30.9
Min nTPM: 18.1
Sample A Female 24.6
Sample B Female 18.1
Sample C Male 30.7
Sample D Male 30.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.1
Samples: 4

Max nTPM: 42.4
Min nTPM: 34.1
Sample A Male 42.4
Sample B Male 40.0
Sample C Female 39.8
Sample D Female 34.1
Hippocampal formation
nTPM: 38.8
Samples: 4

Max nTPM: 42.7
Min nTPM: 34.8
Sample A Male 42.7
Sample B Male 34.8
Sample C Female 40.5
Sample D Female 37.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
68666595 Antisense, RP_050126_02_E11, Mouse strain C57BL/6J (56 days, male) 9.2

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