HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:29.6 nTPM
HPA:29.6 nTPM
GTEx:39.4 nTPM
FANTOM5:69.6 Scaled Tags Per Million
Pig:45.5 nTPM
Mouse:145.9 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.6
Sample id Sample description nTPM
Hippocampus
nTPM: 23.3
2621 Female, age 67, right hemisphere 31.4
1898 Male, age 80, left hemisphere 29.4
1855 Male, age 76, left hemisphere 28.1
2529 Female, age 94, left hemisphere 18.0
1911 Female, age 85, right hemisphere 17.3
2148 Female, age 91, left hemisphere 15.8
Dentate gyrus
nTPM: 24.8
2530 Female, age 94, left hemisphere 35.3
2010 Male, age 76, both hemispheres 32.5
1927 Female, age 91, both hemispheres 27.6
2246 Female, age 85, both hemispheres 24.8
2528 Male, age 74, both hemispheres 18.1
2531 Female, age 67, both hemispheres 10.6
Entorhinal gyrus
nTPM: 29.6
2613 Female, age 94, left hemisphere 39.5
2764 Male, age 80, right hemisphere 35.5
2117 Female, age 91, right hemisphere 32.2
1938 Female, age 85, left hemisphere 27.3
2686 Male, age 75, right hemisphere 23.4
1787 Male, age 76, left hemisphere 19.6
Hippocampus, CA1
nTPM: 27.5
2749 Male, age 80, left hemisphere 57.6
1873 Female, age 85, both hemispheres 31.4
2527 Male, age 74, both hemispheres 20.7
2045 Male, age 76, both hemispheres 17.5
2082 Female, age 91, right hemisphere 10.2
Hippocampus, CA2
nTPM: 28.0
1963 Male, age 80, left hemisphere 51.9
1892 Male, age 76, both hemispheres 39.0
2437 Female, age 94, left hemisphere 26.7
2249 Male, age 74, both hemispheres 19.1
1940 Female, age 85, left hemisphere 18.9
2113 Female, age 91, right hemisphere 12.7
Hippocampus, CA3
nTPM: 18.4
2137 Male, age 80, left hemisphere 24.8
2620 Female, age 94, left hemisphere 23.6
1867 Male, age 76, both hemispheres 18.6
1891 Female, age 85, both hemispheres 17.5
2436 Male, age 74, both hemispheres 13.2
2861 Female, age 67, both hemispheres 12.9
Parahippocampal cortex
nTPM: 24.0
2532 Female, age 72, left hemisphere 36.2
1850 Male, age 80, both hemispheres 30.2
2692 Male, age 74, both hemispheres 28.4
2693 Female, age 94, both hemispheres 26.3
1933 Female, age 85, both hemispheres 22.9
2245 Female, age 91, both hemispheres 22.1
2250 Female, age 67, right hemisphere 21.7
1990 Female, age 91, right hemisphere 18.8
2018 Male, age 76, both hemispheres 17.6
2622 Female, age 67, right hemisphere 15.4
Perirhinal gyrus
nTPM: 22.0
1794 Male, age 80, right hemisphere 27.4
2521 Female, age 94, right hemisphere 25.0
1847 Female, age 91, left hemisphere 22.6
1841 Female, age 85, right hemisphere 18.7
2848 Male, age 76, right hemisphere 16.3
Subiculum
nTPM: 24.4
2438 Female, age 94, left hemisphere 32.6
2042 Male, age 76, both hemispheres 28.3
1901 Male, age 80, both hemispheres 27.7
2619 Male, age 74, both hemispheres 25.4
1977 Female, age 85, both hemispheres 18.9
2729 Female, age 91, right hemisphere 13.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.4
Samples: 197

Max nTPM: 107.8
Min nTPM: 10.5
Std nTPM: 13.2
Median nTPM: 37.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 107.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 79.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 77.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 73.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 73.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 71.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 68.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 64.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 64.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 64.1
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 63.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.6
FF:10169-103B7 60 years, female 79.5
FF:10153-102I9 76 years, female 59.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.5
Samples: 4

Max nTPM: 66.2
Min nTPM: 33.4
Sample A Female 66.2
Sample B Female 42.7
Sample C Male 33.4
Sample D Male 39.7
Entorhinal cortex
nTPM: 32.5
Samples: 4

Max nTPM: 37.9
Min nTPM: 27.7
Sample A Female 28.1
Sample B Female 37.9
Sample C Male 27.7
Sample D Male 36.3
Subiculum
nTPM: 27.4
Samples: 4

Max nTPM: 33.2
Min nTPM: 24.4
Sample A Female 33.2
Sample B Female 24.4
Sample C Male 26.9
Sample D Male 25.2
Ventral hippocampus
nTPM: 34.2
Samples: 4

Max nTPM: 39.7
Min nTPM: 21.6
Sample A Female 37.7
Sample B Female 21.6
Sample C Male 39.7
Sample D Male 37.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 145.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 105.5
Samples: 4

Max nTPM: 108.1
Min nTPM: 102.3
Sample A Male 108.1
Sample B Male 106.8
Sample C Female 104.7
Sample D Female 102.3
Hippocampal formation
nTPM: 145.9
Samples: 4

Max nTPM: 186.6
Min nTPM: 116.4
Sample A Male 116.4
Sample B Male 149.4
Sample C Female 186.6
Sample D Female 131.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
73496905 Antisense, RP_051019_04_A05, Mouse strain C57BL/6J (56 days, male) 1.9

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