HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.8 nTPM
HPA:14.8 nTPM
GTEx:10.1 nTPM
FANTOM5:21.3 Scaled Tags Per Million
Pig:19.9 nTPM
Mouse:12.7 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054063
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.8
Sample id Sample description nTPM
Hippocampus
nTPM: 13.9
2529 Female, age 94, left hemisphere 15.4
2621 Female, age 67, right hemisphere 14.1
1898 Male, age 80, left hemisphere 14.0
2148 Female, age 91, left hemisphere 13.9
1855 Male, age 76, left hemisphere 13.8
1911 Female, age 85, right hemisphere 12.4
Dentate gyrus
nTPM: 14.1
2530 Female, age 94, left hemisphere 15.1
2528 Male, age 74, both hemispheres 14.3
1927 Female, age 91, both hemispheres 14.2
2246 Female, age 85, both hemispheres 14.1
2531 Female, age 67, both hemispheres 14.0
2010 Male, age 76, both hemispheres 12.8
Entorhinal gyrus
nTPM: 14.2
2764 Male, age 80, right hemisphere 15.3
2613 Female, age 94, left hemisphere 14.5
1787 Male, age 76, left hemisphere 14.3
2117 Female, age 91, right hemisphere 14.1
2686 Male, age 75, right hemisphere 13.7
1938 Female, age 85, left hemisphere 13.6
Hippocampus, CA1
nTPM: 13.7
2082 Female, age 91, right hemisphere 14.3
2045 Male, age 76, both hemispheres 14.2
2527 Male, age 74, both hemispheres 13.6
2749 Male, age 80, left hemisphere 13.5
1873 Female, age 85, both hemispheres 13.1
Hippocampus, CA2
nTPM: 14.3
1940 Female, age 85, left hemisphere 15.3
2249 Male, age 74, both hemispheres 14.5
2437 Female, age 94, left hemisphere 14.4
2113 Female, age 91, right hemisphere 14.2
1963 Male, age 80, left hemisphere 13.9
1892 Male, age 76, both hemispheres 13.5
Hippocampus, CA3
nTPM: 14.8
2436 Male, age 74, both hemispheres 19.5
1867 Male, age 76, both hemispheres 15.6
1891 Female, age 85, both hemispheres 14.3
2861 Female, age 67, both hemispheres 13.4
2137 Male, age 80, left hemisphere 13.1
2620 Female, age 94, left hemisphere 13.0
Parahippocampal cortex
nTPM: 13.8
2018 Male, age 76, both hemispheres 14.9
2622 Female, age 67, right hemisphere 14.5
1933 Female, age 85, both hemispheres 14.3
1990 Female, age 91, right hemisphere 14.2
1850 Male, age 80, both hemispheres 14.1
2532 Female, age 72, left hemisphere 13.7
2692 Male, age 74, both hemispheres 13.7
2250 Female, age 67, right hemisphere 13.2
2693 Female, age 94, both hemispheres 13.2
2245 Female, age 91, both hemispheres 12.1
Perirhinal gyrus
nTPM: 13.8
1841 Female, age 85, right hemisphere 14.8
1794 Male, age 80, right hemisphere 13.9
2848 Male, age 76, right hemisphere 13.8
1847 Female, age 91, left hemisphere 13.6
2521 Female, age 94, right hemisphere 12.7
Subiculum
nTPM: 14.5
2438 Female, age 94, left hemisphere 15.7
2619 Male, age 74, both hemispheres 14.8
2729 Female, age 91, right hemisphere 14.7
2042 Male, age 76, both hemispheres 14.6
1977 Female, age 85, both hemispheres 13.9
1901 Male, age 80, both hemispheres 13.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.1
Samples: 197

Max nTPM: 21.7
Min nTPM: 5.1
Std nTPM: 2.2
Median nTPM: 9.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 21.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 19.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 16.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 15.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 15.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 14.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 14.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 14.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 13.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 13.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 13.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.3
FF:10153-102I9 76 years, female 24.9
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.9
Samples: 4

Max nTPM: 21.4
Min nTPM: 16.8
Sample A Female 21.4
Sample B Female 20.0
Sample C Male 21.2
Sample D Male 16.8
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 19.0
Min nTPM: 17.2
Sample A Female 19.0
Sample B Female 17.9
Sample C Male 17.2
Sample D Male 17.4
Subiculum
nTPM: 18.0
Samples: 4

Max nTPM: 19.1
Min nTPM: 16.7
Sample A Female 19.1
Sample B Female 18.0
Sample C Male 16.7
Sample D Male 18.0
Ventral hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 20.5
Min nTPM: 17.7
Sample A Female 18.6
Sample B Female 17.7
Sample C Male 20.5
Sample D Male 20.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 13.7
Min nTPM: 11.3
Sample A Male 13.7
Sample B Male 12.5
Sample C Female 11.6
Sample D Female 11.3
Hippocampal formation
nTPM: 12.7
Samples: 4

Max nTPM: 13.7
Min nTPM: 11.9
Sample A Male 12.1
Sample B Male 11.9
Sample C Female 13.7
Sample D Female 13.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
576417 Antisense, RP_040826_01_G03, Mouse strain C57BL/6J (56 days, male) 0.7

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