HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:25.8 nTPM
HPA:25.8 nTPM
GTEx:20.4 nTPM
FANTOM5:27.1 Scaled Tags Per Million
Pig:18.8 nTPM
Mouse:9.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016616Antibody CAB012465
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.8
Sample id Sample description nTPM
Hippocampus
nTPM: 24.1
1898 Male, age 80, left hemisphere 29.9
1855 Male, age 76, left hemisphere 27.9
2621 Female, age 67, right hemisphere 24.5
2148 Female, age 91, left hemisphere 23.7
2529 Female, age 94, left hemisphere 19.9
1911 Female, age 85, right hemisphere 18.5
Dentate gyrus
nTPM: 24.6
1927 Female, age 91, both hemispheres 27.7
2010 Male, age 76, both hemispheres 27.6
2530 Female, age 94, left hemisphere 24.0
2528 Male, age 74, both hemispheres 23.4
2531 Female, age 67, both hemispheres 22.5
2246 Female, age 85, both hemispheres 22.3
Entorhinal gyrus
nTPM: 21.1
2613 Female, age 94, left hemisphere 23.0
2686 Male, age 75, right hemisphere 21.4
1938 Female, age 85, left hemisphere 21.0
2117 Female, age 91, right hemisphere 20.7
1787 Male, age 76, left hemisphere 20.4
2764 Male, age 80, right hemisphere 20.2
Hippocampus, CA1
nTPM: 25.8
2749 Male, age 80, left hemisphere 34.4
1873 Female, age 85, both hemispheres 27.0
2045 Male, age 76, both hemispheres 23.0
2082 Female, age 91, right hemisphere 22.7
2527 Male, age 74, both hemispheres 21.8
Hippocampus, CA2
nTPM: 23.0
1892 Male, age 76, both hemispheres 28.8
1963 Male, age 80, left hemisphere 28.8
2249 Male, age 74, both hemispheres 20.9
2437 Female, age 94, left hemisphere 20.8
1940 Female, age 85, left hemisphere 19.7
2113 Female, age 91, right hemisphere 19.2
Hippocampus, CA3
nTPM: 24.5
2137 Male, age 80, left hemisphere 27.9
2620 Female, age 94, left hemisphere 26.4
1867 Male, age 76, both hemispheres 25.4
2861 Female, age 67, both hemispheres 24.9
2436 Male, age 74, both hemispheres 21.8
1891 Female, age 85, both hemispheres 20.9
Parahippocampal cortex
nTPM: 20.1
1850 Male, age 80, both hemispheres 21.5
2693 Female, age 94, both hemispheres 21.0
2692 Male, age 74, both hemispheres 20.9
1933 Female, age 85, both hemispheres 20.8
2245 Female, age 91, both hemispheres 20.3
2622 Female, age 67, right hemisphere 20.3
2532 Female, age 72, left hemisphere 19.7
1990 Female, age 91, right hemisphere 19.5
2250 Female, age 67, right hemisphere 19.1
2018 Male, age 76, both hemispheres 17.8
Perirhinal gyrus
nTPM: 21.3
1794 Male, age 80, right hemisphere 23.5
1847 Female, age 91, left hemisphere 23.5
2521 Female, age 94, right hemisphere 21.5
1841 Female, age 85, right hemisphere 19.9
2848 Male, age 76, right hemisphere 18.2
Subiculum
nTPM: 22.3
1901 Male, age 80, both hemispheres 24.8
2438 Female, age 94, left hemisphere 23.5
2619 Male, age 74, both hemispheres 22.4
2729 Female, age 91, right hemisphere 21.7
1977 Female, age 85, both hemispheres 20.8
2042 Male, age 76, both hemispheres 20.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.4
Samples: 197

Max nTPM: 35.9
Min nTPM: 13.0
Std nTPM: 3.0
Median nTPM: 20.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 35.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 30.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 29.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 26.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 26.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 26.5
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 26.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 26.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 26.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 26.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.1
FF:10153-102I9 76 years, female 28.2
FF:10169-103B7 60 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.8
Samples: 4

Max nTPM: 22.3
Min nTPM: 16.2
Sample A Female 22.3
Sample B Female 18.5
Sample C Male 18.2
Sample D Male 16.2
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 18.6
Min nTPM: 14.1
Sample A Female 18.6
Sample B Female 16.4
Sample C Male 16.1
Sample D Male 14.1
Subiculum
nTPM: 14.4
Samples: 4

Max nTPM: 17.9
Min nTPM: 12.7
Sample A Female 17.9
Sample B Female 12.7
Sample C Male 13.0
Sample D Male 13.9
Ventral hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 20.6
Min nTPM: 13.5
Sample A Female 16.7
Sample B Female 13.5
Sample C Male 19.7
Sample D Male 20.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.1
Sample A Male 10.0
Sample B Male 8.1
Sample C Female 8.8
Sample D Female 10.3
Hippocampal formation
nTPM: 9.8
Samples: 4

Max nTPM: 11.6
Min nTPM: 8.1
Sample A Male 8.1
Sample B Male 10.1
Sample C Female 11.6
Sample D Female 9.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71763655 Antisense, RP_050921_02_D06, Mouse strain C57BL/6J (56 days, male) 0.1

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