HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:30.5 nTPM
HPA:30.5 nTPM
GTEx:42.6 nTPM
FANTOM5:108.0 Scaled Tags Per Million
Pig:43.6 nTPM
Mouse:61.0 nTPM
Allen mouse:11.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.5
Sample id Sample description nTPM
Hippocampus
nTPM: 23.7
1898 Male, age 80, left hemisphere 30.9
2621 Female, age 67, right hemisphere 23.8
2529 Female, age 94, left hemisphere 23.4
1855 Male, age 76, left hemisphere 23.0
1911 Female, age 85, right hemisphere 20.8
2148 Female, age 91, left hemisphere 20.5
Dentate gyrus
nTPM: 24.1
1927 Female, age 91, both hemispheres 29.1
2530 Female, age 94, left hemisphere 25.2
2528 Male, age 74, both hemispheres 24.5
2010 Male, age 76, both hemispheres 22.3
2531 Female, age 67, both hemispheres 22.2
2246 Female, age 85, both hemispheres 21.7
Entorhinal gyrus
nTPM: 24.1
2764 Male, age 80, right hemisphere 28.3
1787 Male, age 76, left hemisphere 24.7
1938 Female, age 85, left hemisphere 23.8
2613 Female, age 94, left hemisphere 23.6
2686 Male, age 75, right hemisphere 23.5
2117 Female, age 91, right hemisphere 20.7
Hippocampus, CA1
nTPM: 25.3
2749 Male, age 80, left hemisphere 30.8
2045 Male, age 76, both hemispheres 25.5
1873 Female, age 85, both hemispheres 24.3
2527 Male, age 74, both hemispheres 24.1
2082 Female, age 91, right hemisphere 22.0
Hippocampus, CA2
nTPM: 24.3
1892 Male, age 76, both hemispheres 29.6
1963 Male, age 80, left hemisphere 25.6
2113 Female, age 91, right hemisphere 23.7
2249 Male, age 74, both hemispheres 23.0
1940 Female, age 85, left hemisphere 22.1
2437 Female, age 94, left hemisphere 21.6
Hippocampus, CA3
nTPM: 25.1
2620 Female, age 94, left hemisphere 29.2
2137 Male, age 80, left hemisphere 27.7
1867 Male, age 76, both hemispheres 26.1
2861 Female, age 67, both hemispheres 23.1
1891 Female, age 85, both hemispheres 22.7
2436 Male, age 74, both hemispheres 21.8
Parahippocampal cortex
nTPM: 25.4
1850 Male, age 80, both hemispheres 32.2
2693 Female, age 94, both hemispheres 29.6
1933 Female, age 85, both hemispheres 28.0
2245 Female, age 91, both hemispheres 26.2
1990 Female, age 91, right hemisphere 25.8
2250 Female, age 67, right hemisphere 23.8
2018 Male, age 76, both hemispheres 23.7
2532 Female, age 72, left hemisphere 22.6
2692 Male, age 74, both hemispheres 22.1
2622 Female, age 67, right hemisphere 20.5
Perirhinal gyrus
nTPM: 30.5
1847 Female, age 91, left hemisphere 34.4
1794 Male, age 80, right hemisphere 33.8
1841 Female, age 85, right hemisphere 29.8
2521 Female, age 94, right hemisphere 27.8
2848 Male, age 76, right hemisphere 26.5
Subiculum
nTPM: 21.5
1977 Female, age 85, both hemispheres 24.5
2619 Male, age 74, both hemispheres 22.9
1901 Male, age 80, both hemispheres 22.8
2729 Female, age 91, right hemisphere 20.4
2438 Female, age 94, left hemisphere 19.8
2042 Male, age 76, both hemispheres 18.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.6
Samples: 197

Max nTPM: 101.4
Min nTPM: 22.2
Std nTPM: 12.8
Median nTPM: 40.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 101.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 90.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 82.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 71.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 70.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 68.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 68.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 67.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 67.0
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 65.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 64.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 108.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 108.0
FF:10169-103B7 60 years, female 124.5
FF:10153-102I9 76 years, female 91.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.0
Samples: 4

Max nTPM: 45.1
Min nTPM: 33.6
Sample A Female 45.1
Sample B Female 39.2
Sample C Male 33.9
Sample D Male 33.6
Entorhinal cortex
nTPM: 42.4
Samples: 4

Max nTPM: 45.0
Min nTPM: 38.8
Sample A Female 45.0
Sample B Female 43.9
Sample C Male 41.8
Sample D Male 38.8
Subiculum
nTPM: 43.6
Samples: 4

Max nTPM: 54.9
Min nTPM: 36.6
Sample A Female 54.9
Sample B Female 42.7
Sample C Male 40.2
Sample D Male 36.6
Ventral hippocampus
nTPM: 38.2
Samples: 4

Max nTPM: 43.2
Min nTPM: 34.2
Sample A Female 35.7
Sample B Female 34.2
Sample C Male 43.2
Sample D Male 39.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 61.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.0
Samples: 4

Max nTPM: 70.1
Min nTPM: 51.3
Sample A Male 51.3
Sample B Male 56.0
Sample C Female 66.7
Sample D Female 70.1
Hippocampal formation
nTPM: 58.1
Samples: 4

Max nTPM: 60.7
Min nTPM: 54.6
Sample A Male 60.7
Sample B Male 56.4
Sample C Female 54.6
Sample D Female 60.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.7
71991768 Antisense, RP_051012_03_D09, Mouse strain C57BL/6J (56 days, male) 11.7

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