HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:114.1 nTPM
HPA:114.1 nTPM
GTEx:149.2 nTPM
FANTOM5:48.8 Scaled Tags Per Million
Pig:47.7 nTPM
Mouse:73.3 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028814Antibody CAB004322
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 114.1
Sample id Sample description nTPM
Hippocampus
nTPM: 114.1
2621 Female, age 67, right hemisphere 125.5
1898 Male, age 80, left hemisphere 117.8
1855 Male, age 76, left hemisphere 113.4
2148 Female, age 91, left hemisphere 110.9
1911 Female, age 85, right hemisphere 109.7
2529 Female, age 94, left hemisphere 107.1
Dentate gyrus
nTPM: 107.5
1927 Female, age 91, both hemispheres 115.6
2531 Female, age 67, both hemispheres 114.0
2010 Male, age 76, both hemispheres 106.8
2528 Male, age 74, both hemispheres 106.3
2530 Female, age 94, left hemisphere 104.4
2246 Female, age 85, both hemispheres 97.7
Entorhinal gyrus
nTPM: 100.1
2613 Female, age 94, left hemisphere 112.4
2764 Male, age 80, right hemisphere 100.1
2686 Male, age 75, right hemisphere 99.3
1938 Female, age 85, left hemisphere 98.0
1787 Male, age 76, left hemisphere 96.5
2117 Female, age 91, right hemisphere 94.2
Hippocampus, CA1
nTPM: 112.4
2749 Male, age 80, left hemisphere 135.0
2527 Male, age 74, both hemispheres 115.5
1873 Female, age 85, both hemispheres 109.4
2082 Female, age 91, right hemisphere 103.4
2045 Male, age 76, both hemispheres 98.6
Hippocampus, CA2
nTPM: 108.8
1963 Male, age 80, left hemisphere 142.0
2113 Female, age 91, right hemisphere 112.0
1892 Male, age 76, both hemispheres 109.9
2437 Female, age 94, left hemisphere 101.2
2249 Male, age 74, both hemispheres 99.9
1940 Female, age 85, left hemisphere 88.0
Hippocampus, CA3
nTPM: 111.7
2137 Male, age 80, left hemisphere 134.5
2861 Female, age 67, both hemispheres 132.5
2620 Female, age 94, left hemisphere 109.4
1867 Male, age 76, both hemispheres 101.4
2436 Male, age 74, both hemispheres 97.2
1891 Female, age 85, both hemispheres 95.0
Parahippocampal cortex
nTPM: 99.1
2245 Female, age 91, both hemispheres 114.3
2622 Female, age 67, right hemisphere 103.3
2018 Male, age 76, both hemispheres 101.3
2250 Female, age 67, right hemisphere 98.8
1933 Female, age 85, both hemispheres 98.7
1850 Male, age 80, both hemispheres 96.7
2693 Female, age 94, both hemispheres 96.0
1990 Female, age 91, right hemisphere 95.5
2532 Female, age 72, left hemisphere 94.3
2692 Male, age 74, both hemispheres 92.0
Perirhinal gyrus
nTPM: 100.3
1847 Female, age 91, left hemisphere 108.3
1794 Male, age 80, right hemisphere 101.6
2521 Female, age 94, right hemisphere 101.6
1841 Female, age 85, right hemisphere 95.7
2848 Male, age 76, right hemisphere 94.4
Subiculum
nTPM: 95.7
2729 Female, age 91, right hemisphere 101.6
1901 Male, age 80, both hemispheres 98.8
2619 Male, age 74, both hemispheres 96.0
2042 Male, age 76, both hemispheres 95.2
1977 Female, age 85, both hemispheres 94.2
2438 Female, age 94, left hemisphere 88.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 149.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 149.2
Samples: 197

Max nTPM: 485.4
Min nTPM: 42.0
Std nTPM: 70.9
Median nTPM: 139.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 485.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 399.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 374.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 336.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 316.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 316.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 305.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 303.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 302.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 284.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 281.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.8
FF:10169-103B7 60 years, female 51.2
FF:10153-102I9 76 years, female 46.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.7
Samples: 4

Max nTPM: 57.1
Min nTPM: 34.9
Sample A Female 57.1
Sample B Female 52.6
Sample C Male 46.1
Sample D Male 34.9
Entorhinal cortex
nTPM: 47.5
Samples: 4

Max nTPM: 55.6
Min nTPM: 38.8
Sample A Female 46.0
Sample B Female 49.6
Sample C Male 55.6
Sample D Male 38.8
Subiculum
nTPM: 39.5
Samples: 4

Max nTPM: 51.0
Min nTPM: 32.1
Sample A Female 51.0
Sample B Female 36.0
Sample C Male 38.7
Sample D Male 32.1
Ventral hippocampus
nTPM: 45.5
Samples: 4

Max nTPM: 56.8
Min nTPM: 33.0
Sample A Female 41.2
Sample B Female 33.0
Sample C Male 51.1
Sample D Male 56.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.3
Samples: 4

Max nTPM: 75.4
Min nTPM: 71.3
Sample A Male 71.3
Sample B Male 75.4
Sample C Female 72.4
Sample D Female 74.1
Hippocampal formation
nTPM: 68.8
Samples: 4

Max nTPM: 73.7
Min nTPM: 65.9
Sample A Male 73.7
Sample B Male 68.0
Sample C Female 65.9
Sample D Female 67.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
74881827 Antisense, RP_060315_04_D04, Mouse strain C57BL/6J (56 days, male) 2.2
69528082 Antisense, RP_050421_03_A10, Mouse strain C57BL/6J (56 days, male) 1.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.