HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.9 nTPM
HPA:40.9 nTPM
GTEx:33.2 nTPM
FANTOM5:53.0 Scaled Tags Per Million
Mouse:23.2 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019254
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.9
Sample id Sample description nTPM
Hippocampus
nTPM: 38.9
2529 Female, age 94, left hemisphere 42.3
1898 Male, age 80, left hemisphere 40.3
2621 Female, age 67, right hemisphere 39.6
1855 Male, age 76, left hemisphere 39.4
1911 Female, age 85, right hemisphere 36.1
2148 Female, age 91, left hemisphere 35.5
Dentate gyrus
nTPM: 38.4
2010 Male, age 76, both hemispheres 42.3
1927 Female, age 91, both hemispheres 41.1
2246 Female, age 85, both hemispheres 38.5
2531 Female, age 67, both hemispheres 36.5
2528 Male, age 74, both hemispheres 36.1
2530 Female, age 94, left hemisphere 35.7
Entorhinal gyrus
nTPM: 37.3
1787 Male, age 76, left hemisphere 40.7
2764 Male, age 80, right hemisphere 40.1
1938 Female, age 85, left hemisphere 38.9
2117 Female, age 91, right hemisphere 36.3
2613 Female, age 94, left hemisphere 34.1
2686 Male, age 75, right hemisphere 33.4
Hippocampus, CA1
nTPM: 39.3
2749 Male, age 80, left hemisphere 44.2
1873 Female, age 85, both hemispheres 40.8
2045 Male, age 76, both hemispheres 40.4
2527 Male, age 74, both hemispheres 36.6
2082 Female, age 91, right hemisphere 34.7
Hippocampus, CA2
nTPM: 38.4
1892 Male, age 76, both hemispheres 43.4
1963 Male, age 80, left hemisphere 39.3
1940 Female, age 85, left hemisphere 39.1
2249 Male, age 74, both hemispheres 37.3
2437 Female, age 94, left hemisphere 36.5
2113 Female, age 91, right hemisphere 35.1
Hippocampus, CA3
nTPM: 37.9
2137 Male, age 80, left hemisphere 41.6
1867 Male, age 76, both hemispheres 40.0
2620 Female, age 94, left hemisphere 38.7
2436 Male, age 74, both hemispheres 36.9
1891 Female, age 85, both hemispheres 35.9
2861 Female, age 67, both hemispheres 34.1
Parahippocampal cortex
nTPM: 38.5
2018 Male, age 76, both hemispheres 44.6
1850 Male, age 80, both hemispheres 41.0
2250 Female, age 67, right hemisphere 40.5
1933 Female, age 85, both hemispheres 40.3
2245 Female, age 91, both hemispheres 39.3
1990 Female, age 91, right hemisphere 37.9
2532 Female, age 72, left hemisphere 37.7
2622 Female, age 67, right hemisphere 35.4
2692 Male, age 74, both hemispheres 34.0
2693 Female, age 94, both hemispheres 33.9
Perirhinal gyrus
nTPM: 40.9
1847 Female, age 91, left hemisphere 43.9
1841 Female, age 85, right hemisphere 42.5
1794 Male, age 80, right hemisphere 41.9
2848 Male, age 76, right hemisphere 40.7
2521 Female, age 94, right hemisphere 35.4
Subiculum
nTPM: 37.7
1901 Male, age 80, both hemispheres 40.3
1977 Female, age 85, both hemispheres 39.9
2042 Male, age 76, both hemispheres 39.5
2619 Male, age 74, both hemispheres 35.8
2729 Female, age 91, right hemisphere 35.7
2438 Female, age 94, left hemisphere 34.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.2
Samples: 197

Max nTPM: 70.5
Min nTPM: 16.0
Std nTPM: 10.5
Median nTPM: 33.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 70.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 68.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 63.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 61.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 56.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 54.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 51.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 51.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 50.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 50.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 48.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.0
FF:10169-103B7 60 years, female 66.9
FF:10153-102I9 76 years, female 39.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.2
Samples: 4

Max nTPM: 25.7
Min nTPM: 21.7
Sample A Male 23.3
Sample B Male 25.7
Sample C Female 22.2
Sample D Female 21.7
Hippocampal formation
nTPM: 20.1
Samples: 4

Max nTPM: 21.5
Min nTPM: 18.6
Sample A Male 21.5
Sample B Male 19.4
Sample C Female 18.6
Sample D Female 20.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
68546434 Antisense, RP_050120_02_E03, Mouse strain C57BL/6J (56 days, male) 1.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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