HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.2 nTPM
HPA:11.2 nTPM
GTEx:11.0 nTPM
FANTOM5:49.6 Scaled Tags Per Million
Pig:14.6 nTPM
Mouse:34.7 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037997Antibody HPA037998Antibody CAB025485
Glial cells LowLowNot detected
Neuronal cells HighMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.2
Sample id Sample description nTPM
Hippocampus
nTPM: 9.2
1898 Male, age 80, left hemisphere 10.3
1855 Male, age 76, left hemisphere 9.4
1911 Female, age 85, right hemisphere 9.4
2621 Female, age 67, right hemisphere 9.3
2148 Female, age 91, left hemisphere 8.7
2529 Female, age 94, left hemisphere 8.2
Dentate gyrus
nTPM: 9.3
1927 Female, age 91, both hemispheres 10.3
2010 Male, age 76, both hemispheres 9.9
2246 Female, age 85, both hemispheres 9.7
2531 Female, age 67, both hemispheres 9.5
2528 Male, age 74, both hemispheres 8.3
2530 Female, age 94, left hemisphere 8.3
Entorhinal gyrus
nTPM: 9.8
1787 Male, age 76, left hemisphere 11.4
1938 Female, age 85, left hemisphere 10.8
2764 Male, age 80, right hemisphere 9.9
2686 Male, age 75, right hemisphere 9.1
2117 Female, age 91, right hemisphere 9.0
2613 Female, age 94, left hemisphere 8.7
Hippocampus, CA1
nTPM: 10.2
2749 Male, age 80, left hemisphere 12.6
1873 Female, age 85, both hemispheres 10.5
2045 Male, age 76, both hemispheres 10.2
2527 Male, age 74, both hemispheres 9.2
2082 Female, age 91, right hemisphere 8.6
Hippocampus, CA2
nTPM: 9.6
1892 Male, age 76, both hemispheres 12.5
1963 Male, age 80, left hemisphere 10.4
1940 Female, age 85, left hemisphere 9.2
2113 Female, age 91, right hemisphere 8.7
2437 Female, age 94, left hemisphere 8.7
2249 Male, age 74, both hemispheres 8.1
Hippocampus, CA3
nTPM: 10.0
2137 Male, age 80, left hemisphere 12.6
1867 Male, age 76, both hemispheres 11.0
1891 Female, age 85, both hemispheres 9.8
2620 Female, age 94, left hemisphere 9.6
2861 Female, age 67, both hemispheres 8.5
2436 Male, age 74, both hemispheres 8.3
Parahippocampal cortex
nTPM: 10.2
1850 Male, age 80, both hemispheres 11.6
2532 Female, age 72, left hemisphere 10.9
1933 Female, age 85, both hemispheres 10.6
2693 Female, age 94, both hemispheres 10.5
1990 Female, age 91, right hemisphere 10.1
2250 Female, age 67, right hemisphere 10.1
2245 Female, age 91, both hemispheres 10.0
2018 Male, age 76, both hemispheres 9.8
2692 Male, age 74, both hemispheres 9.6
2622 Female, age 67, right hemisphere 8.4
Perirhinal gyrus
nTPM: 11.2
1841 Female, age 85, right hemisphere 11.8
2848 Male, age 76, right hemisphere 11.6
1794 Male, age 80, right hemisphere 11.4
1847 Female, age 91, left hemisphere 10.9
2521 Female, age 94, right hemisphere 10.4
Subiculum
nTPM: 9.6
1901 Male, age 80, both hemispheres 10.4
1977 Female, age 85, both hemispheres 10.3
2042 Male, age 76, both hemispheres 9.7
2438 Female, age 94, left hemisphere 9.6
2619 Male, age 74, both hemispheres 9.1
2729 Female, age 91, right hemisphere 8.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.0
Samples: 197

Max nTPM: 27.9
Min nTPM: 6.2
Std nTPM: 2.9
Median nTPM: 10.5
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 27.9
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 25.7
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 22.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 20.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 18.1
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 17.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 17.4
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 17.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 16.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 16.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 16.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.6
FF:10169-103B7 60 years, female 57.5
FF:10153-102I9 76 years, female 41.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 16.0
Min nTPM: 12.8
Sample A Female 15.7
Sample B Female 16.0
Sample C Male 13.8
Sample D Male 12.8
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 13.3
Min nTPM: 10.2
Sample A Female 12.2
Sample B Female 13.3
Sample C Male 12.1
Sample D Male 10.2
Subiculum
nTPM: 11.8
Samples: 4

Max nTPM: 15.0
Min nTPM: 10.3
Sample A Female 15.0
Sample B Female 10.4
Sample C Male 10.3
Sample D Male 11.3
Ventral hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 16.0
Min nTPM: 10.4
Sample A Female 12.9
Sample B Female 10.4
Sample C Male 13.8
Sample D Male 16.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.3
Samples: 4

Max nTPM: 34.6
Min nTPM: 28.3
Sample A Male 28.3
Sample B Male 31.9
Sample C Female 30.4
Sample D Female 34.6
Hippocampal formation
nTPM: 34.7
Samples: 4

Max nTPM: 36.7
Min nTPM: 32.0
Sample A Male 34.4
Sample B Male 36.7
Sample C Female 35.7
Sample D Female 32.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
74427052 Antisense, RP_051206_02_H08, Mouse strain C57BL/6J (56 days, male) 0.3

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