AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:43.5 nTPM
HPA:43.5 nTPM
GTEx:32.5 nTPM
FANTOM5:19.0 Scaled Tags Per Million
Pig:7.0 nTPM
Mouse:82.6 nTPM
Allen mouse:8.7 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 43.5
Sample id Sample description nTPM
Amygdala
nTPM: 42.8
2814 Male, age 76, right hemisphere 45.5
2695 Female, age 67, right hemisphere 43.3
1987 Female, age 91, left hemisphere 42.7
2514 Male, age 75, right hemisphere 42.2
2517 Female, age 94, left hemisphere 40.4
Basal amygdala
nTPM: 41.7
2110 Male, age 80, left hemisphere 43.5
1955 Male, age 76, both hemispheres 42.7
2243 Female, age 91, right hemisphere 42.6
2685 Female, age 94, left hemisphere 42.1
2609 Male, age 75, right hemisphere 41.4
2827 Female, age 67, right hemisphere 37.6
Central amygdala
nTPM: 43.4
1905 Male, age 76, both hemispheres 45.2
2826 Female, age 94, left hemisphere 43.9
2239 Male, age 80, left hemisphere 43.0
2701 Female, age 91, right hemisphere 42.6
2515 Male, age 75, right hemisphere 42.3
Corticomedial amygdala
nTPM: 41.5
2429 Female, age 94, left hemisphere 43.0
2829 Male, age 80, left hemisphere 42.9
2428 Male, age 75, right hemisphere 42.5
2240 Male, age 76, both hemispheres 41.0
2242 Female, age 91, right hemisphere 41.0
2535 Female, age 67, right hemisphere 38.7
Lateral amygdala
nTPM: 43.5
1883 Male, age 76, both hemispheres 46.2
2534 Female, age 94, left hemisphere 45.2
2516 Male, age 75, right hemisphere 43.4
2256 Male, age 80, left hemisphere 43.0
2255 Female, age 91, right hemisphere 42.9
2830 Female, age 67, right hemisphere 40.3
Stria terminalis, bed nucleus
nTPM: 42.3
1974 Female, age 91, both hemispheres 43.1
2201 Male, age 74, unknown 42.8
2486 Female, age 94, both hemispheres 41.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 32.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 32.5
Samples: 152

Max nTPM: 56.4
Min nTPM: 18.4
Std nTPM: 6.3
Median nTPM: 32.1
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 56.4
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 52.2
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 51.9
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 50.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 49.8
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 45.3
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 44.4
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 44.1
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 43.4
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 42.1
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 42.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 19.0
FF:10151-102I7 76 years, female 19.0

AMYGDALA - Pig RNA-seqi
Average nTPM 7.0
Pig sample Sample description nTPM
Amygdala
nTPM: 7.0
Samples: 4

Max nTPM: 9.3
Min nTPM: 6.0
Sample A Female 9.3
Sample B Female 6.0
Sample C Male 6.3
Sample D Male 6.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 82.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 82.6
Samples: 4

Max nTPM: 84.5
Min nTPM: 79.2
Sample A Male 84.5
Sample B Male 82.6
Sample C Female 84.0
Sample D Female 79.2

AMYGDALA - Allen Mouse ISHi
Max Expression energy 8.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 8.7
77620381 Antisense, RP_070205_01_E02, Mouse strain C57BL/6J (56 days, male) 8.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.