HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:37.9 nTPM
HPA:37.9 nTPM
GTEx:34.6 nTPM
FANTOM5:108.7 Scaled Tags Per Million
Pig:36.1 nTPM
Mouse:79.6 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.9
Sample id Sample description nTPM
Hippocampus
nTPM: 30.5
1898 Male, age 80, left hemisphere 34.8
2529 Female, age 94, left hemisphere 32.8
2148 Female, age 91, left hemisphere 30.4
2621 Female, age 67, right hemisphere 29.3
1855 Male, age 76, left hemisphere 28.7
1911 Female, age 85, right hemisphere 27.3
Dentate gyrus
nTPM: 31.1
1927 Female, age 91, both hemispheres 34.8
2010 Male, age 76, both hemispheres 31.1
2528 Male, age 74, both hemispheres 30.9
2531 Female, age 67, both hemispheres 30.9
2246 Female, age 85, both hemispheres 30.3
2530 Female, age 94, left hemisphere 28.7
Entorhinal gyrus
nTPM: 33.8
2764 Male, age 80, right hemisphere 38.5
1938 Female, age 85, left hemisphere 36.2
1787 Male, age 76, left hemisphere 35.2
2613 Female, age 94, left hemisphere 32.6
2686 Male, age 75, right hemisphere 30.3
2117 Female, age 91, right hemisphere 30.0
Hippocampus, CA1
nTPM: 32.7
2749 Male, age 80, left hemisphere 43.1
1873 Female, age 85, both hemispheres 31.9
2527 Male, age 74, both hemispheres 30.0
2045 Male, age 76, both hemispheres 29.7
2082 Female, age 91, right hemisphere 28.9
Hippocampus, CA2
nTPM: 31.4
1892 Male, age 76, both hemispheres 37.6
1963 Male, age 80, left hemisphere 34.6
2249 Male, age 74, both hemispheres 30.2
1940 Female, age 85, left hemisphere 29.4
2437 Female, age 94, left hemisphere 28.6
2113 Female, age 91, right hemisphere 28.4
Hippocampus, CA3
nTPM: 33.7
2137 Male, age 80, left hemisphere 40.1
2620 Female, age 94, left hemisphere 36.1
1867 Male, age 76, both hemispheres 33.5
1891 Female, age 85, both hemispheres 31.4
2436 Male, age 74, both hemispheres 31.4
2861 Female, age 67, both hemispheres 29.5
Parahippocampal cortex
nTPM: 32.5
1850 Male, age 80, both hemispheres 39.7
1990 Female, age 91, right hemisphere 36.5
1933 Female, age 85, both hemispheres 33.9
2532 Female, age 72, left hemisphere 31.9
2250 Female, age 67, right hemisphere 31.7
2693 Female, age 94, both hemispheres 30.9
2245 Female, age 91, both hemispheres 30.6
2018 Male, age 76, both hemispheres 30.2
2692 Male, age 74, both hemispheres 30.2
2622 Female, age 67, right hemisphere 29.0
Perirhinal gyrus
nTPM: 37.9
1847 Female, age 91, left hemisphere 40.5
1794 Male, age 80, right hemisphere 40.3
1841 Female, age 85, right hemisphere 38.3
2848 Male, age 76, right hemisphere 37.0
2521 Female, age 94, right hemisphere 33.3
Subiculum
nTPM: 31.5
1977 Female, age 85, both hemispheres 34.4
1901 Male, age 80, both hemispheres 33.7
2438 Female, age 94, left hemisphere 31.5
2619 Male, age 74, both hemispheres 31.1
2729 Female, age 91, right hemisphere 29.5
2042 Male, age 76, both hemispheres 28.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.6
Samples: 197

Max nTPM: 57.4
Min nTPM: 16.4
Std nTPM: 7.2
Median nTPM: 33.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 57.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 56.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 54.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 53.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 53.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 51.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 51.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 50.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 48.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 47.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 108.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 108.7
FF:10169-103B7 60 years, female 108.8
FF:10153-102I9 76 years, female 108.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.2
Samples: 4

Max nTPM: 41.3
Min nTPM: 29.9
Sample A Female 41.3
Sample B Female 38.0
Sample C Male 35.4
Sample D Male 29.9
Entorhinal cortex
nTPM: 33.0
Samples: 4

Max nTPM: 37.2
Min nTPM: 27.8
Sample A Female 33.4
Sample B Female 37.2
Sample C Male 33.4
Sample D Male 27.8
Subiculum
nTPM: 32.6
Samples: 4

Max nTPM: 39.3
Min nTPM: 29.9
Sample A Female 39.3
Sample B Female 30.9
Sample C Male 30.3
Sample D Male 29.9
Ventral hippocampus
nTPM: 33.8
Samples: 4

Max nTPM: 39.3
Min nTPM: 28.0
Sample A Female 33.6
Sample B Female 28.0
Sample C Male 39.3
Sample D Male 34.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 79.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.7
Samples: 4

Max nTPM: 84.3
Min nTPM: 76.4
Sample A Male 76.5
Sample B Male 81.4
Sample C Female 76.4
Sample D Female 84.3
Hippocampal formation
nTPM: 73.9
Samples: 4

Max nTPM: 79.6
Min nTPM: 67.8
Sample A Male 74.2
Sample B Male 74.0
Sample C Female 79.6
Sample D Female 67.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
71494623 Antisense, RP_050913_03_A01, Mouse strain C57BL/6J (56 days, male) 2.9

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