COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:19.6 nTPM
HPA:7.6 nTPM
GTEx:19.6 nTPM
FANTOM5:106.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA017753
Endothelial cells Not detected
Glandular cells High
Peripheral nerve/ganglion Not detected



COLON - HPA RNA-seqi
Average nTPM 7.6
overview
Male, age 54 		Colon sample 67
nTPM: 3.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 2.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 3.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 12.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 6.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 18.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 5.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 12.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 3.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 8.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 9.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 10.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 19.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 19.6
Samples: 373

Max nTPM: 63.0
Min nTPM: 2.3
Std nTPM: 7.7
Median nTPM: 19.0
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 63.0
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 46.0
GTEX-1J1R8-1426-SM-CL55O 40-49 years, male 45.8
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 44.6
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 42.6
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 42.3
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 39.3
GTEX-1R9PO-2026-SM-E9J4N 60-69 years, female 39.3
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 38.9
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 36.5
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 35.3
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Colon - Transverse
Average nTPM: 12.8
Samples: 406

Max nTPM: 63.9
Min nTPM: 1.6
Std nTPM: 9.2
Median nTPM: 10.7
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 63.9
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 40.8
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 39.5
GTEX-1HSMP-2326-SM-D3L8R 70-79 years, male 39.5
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 38.3
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 36.9
GTEX-R45C-2126-SM-EZ6KZ 60-69 years, female 36.0
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 34.8
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 34.6
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 33.7
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 32.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 106.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 106.3
FF:10014-101C5 62,83,84 years, mixed 106.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.