HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.3 nTPM
HPA:17.3 nTPM
GTEx:14.7 nTPM
FANTOM5:61.0 Scaled Tags Per Million
Pig:4.1 nTPM
Mouse:3.3 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027201
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.3
Sample id Sample description nTPM
Hippocampus
nTPM: 15.6
2148 Female, age 91, left hemisphere 18.9
1898 Male, age 80, left hemisphere 15.7
2621 Female, age 67, right hemisphere 15.3
2529 Female, age 94, left hemisphere 15.0
1855 Male, age 76, left hemisphere 14.5
1911 Female, age 85, right hemisphere 14.0
Dentate gyrus
nTPM: 16.6
2531 Female, age 67, both hemispheres 20.8
1927 Female, age 91, both hemispheres 18.0
2246 Female, age 85, both hemispheres 17.1
2528 Male, age 74, both hemispheres 15.1
2530 Female, age 94, left hemisphere 14.6
2010 Male, age 76, both hemispheres 14.0
Entorhinal gyrus
nTPM: 17.2
2686 Male, age 75, right hemisphere 18.9
2764 Male, age 80, right hemisphere 18.9
2613 Female, age 94, left hemisphere 17.7
1787 Male, age 76, left hemisphere 17.2
1938 Female, age 85, left hemisphere 15.6
2117 Female, age 91, right hemisphere 15.2
Hippocampus, CA1
nTPM: 16.0
2045 Male, age 76, both hemispheres 19.8
2082 Female, age 91, right hemisphere 16.3
1873 Female, age 85, both hemispheres 15.4
2527 Male, age 74, both hemispheres 14.9
2749 Male, age 80, left hemisphere 13.7
Hippocampus, CA2
nTPM: 13.8
2113 Female, age 91, right hemisphere 17.2
1940 Female, age 85, left hemisphere 13.7
2249 Male, age 74, both hemispheres 13.6
2437 Female, age 94, left hemisphere 13.1
1892 Male, age 76, both hemispheres 13.0
1963 Male, age 80, left hemisphere 12.4
Hippocampus, CA3
nTPM: 17.0
2861 Female, age 67, both hemispheres 22.6
2620 Female, age 94, left hemisphere 21.3
2137 Male, age 80, left hemisphere 17.2
1891 Female, age 85, both hemispheres 14.5
1867 Male, age 76, both hemispheres 14.0
2436 Male, age 74, both hemispheres 12.8
Parahippocampal cortex
nTPM: 16.7
2622 Female, age 67, right hemisphere 18.9
1990 Female, age 91, right hemisphere 18.7
2532 Female, age 72, left hemisphere 18.5
2693 Female, age 94, both hemispheres 18.5
1850 Male, age 80, both hemispheres 16.3
2018 Male, age 76, both hemispheres 16.1
1933 Female, age 85, both hemispheres 15.9
2250 Female, age 67, right hemisphere 14.9
2245 Female, age 91, both hemispheres 14.7
2692 Male, age 74, both hemispheres 14.0
Perirhinal gyrus
nTPM: 17.3
1794 Male, age 80, right hemisphere 18.2
2848 Male, age 76, right hemisphere 18.1
1841 Female, age 85, right hemisphere 17.3
1847 Female, age 91, left hemisphere 16.6
2521 Female, age 94, right hemisphere 16.4
Subiculum
nTPM: 15.9
2729 Female, age 91, right hemisphere 19.4
1977 Female, age 85, both hemispheres 16.2
2438 Female, age 94, left hemisphere 15.9
2619 Male, age 74, both hemispheres 15.3
1901 Male, age 80, both hemispheres 14.7
2042 Male, age 76, both hemispheres 13.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.7
Samples: 197

Max nTPM: 29.2
Min nTPM: 5.0
Std nTPM: 5.1
Median nTPM: 14.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 29.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 29.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 28.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 27.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 27.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 26.9
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 26.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 25.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 25.1
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 24.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 24.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.0
FF:10153-102I9 76 years, female 62.4
FF:10169-103B7 60 years, female 59.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.1
Samples: 4

Max nTPM: 5.9
Min nTPM: 2.5
Sample A Female 3.6
Sample B Female 4.4
Sample C Male 2.5
Sample D Male 5.9
Entorhinal cortex
nTPM: 1.3
Samples: 4

Max nTPM: 1.5
Min nTPM: 1.0
Sample A Female 1.1
Sample B Female 1.5
Sample C Male 1.4
Sample D Male 1.0
Subiculum
nTPM: 1.5
Samples: 4

Max nTPM: 1.8
Min nTPM: 1.2
Sample A Female 1.2
Sample B Female 1.5
Sample C Male 1.6
Sample D Male 1.8
Ventral hippocampus
nTPM: 3.0
Samples: 4

Max nTPM: 4.3
Min nTPM: 2.0
Sample A Female 2.0
Sample B Female 3.3
Sample C Male 2.2
Sample D Male 4.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.0
Samples: 4

Max nTPM: 2.5
Min nTPM: 1.3
Sample A Male 2.4
Sample B Male 1.3
Sample C Female 2.5
Sample D Female 1.8
Hippocampal formation
nTPM: 3.3
Samples: 4

Max nTPM: 3.6
Min nTPM: 3.0
Sample A Male 3.0
Sample B Male 3.1
Sample C Female 3.6
Sample D Female 3.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
75931444 Antisense, RP_060601_03_D05, Mouse strain C57BL/6J (56 days, male) 0.3

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