HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.5 nTPM
HPA:10.5 nTPM
GTEx:21.0 nTPM
FANTOM5:26.7 Scaled Tags Per Million
Pig:20.0 nTPM
Mouse:12.9 nTPM
Allen mouse:7.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021658
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.5
Sample id Sample description nTPM
Hippocampus
nTPM: 8.4
2621 Female, age 67, right hemisphere 10.1
2148 Female, age 91, left hemisphere 9.8
2529 Female, age 94, left hemisphere 9.3
1911 Female, age 85, right hemisphere 7.9
1855 Male, age 76, left hemisphere 7.5
1898 Male, age 80, left hemisphere 5.8
Dentate gyrus
nTPM: 8.0
2531 Female, age 67, both hemispheres 11.4
2528 Male, age 74, both hemispheres 8.8
2530 Female, age 94, left hemisphere 8.0
2010 Male, age 76, both hemispheres 6.9
2246 Female, age 85, both hemispheres 6.6
1927 Female, age 91, both hemispheres 6.0
Entorhinal gyrus
nTPM: 9.7
2613 Female, age 94, left hemisphere 16.2
2764 Male, age 80, right hemisphere 11.7
1787 Male, age 76, left hemisphere 9.1
2686 Male, age 75, right hemisphere 8.4
1938 Female, age 85, left hemisphere 6.7
2117 Female, age 91, right hemisphere 6.5
Hippocampus, CA1
nTPM: 10.5
2749 Male, age 80, left hemisphere 16.9
2082 Female, age 91, right hemisphere 13.0
2527 Male, age 74, both hemispheres 10.2
1873 Female, age 85, both hemispheres 6.7
2045 Male, age 76, both hemispheres 5.6
Hippocampus, CA2
nTPM: 7.4
2113 Female, age 91, right hemisphere 11.2
1963 Male, age 80, left hemisphere 9.5
2249 Male, age 74, both hemispheres 7.5
2437 Female, age 94, left hemisphere 7.0
1892 Male, age 76, both hemispheres 5.2
1940 Female, age 85, left hemisphere 4.2
Hippocampus, CA3
nTPM: 9.9
2620 Female, age 94, left hemisphere 17.1
2861 Female, age 67, both hemispheres 14.8
2137 Male, age 80, left hemisphere 14.0
2436 Male, age 74, both hemispheres 5.3
1867 Male, age 76, both hemispheres 5.1
1891 Female, age 85, both hemispheres 3.3
Parahippocampal cortex
nTPM: 7.8
2622 Female, age 67, right hemisphere 13.6
2245 Female, age 91, both hemispheres 11.3
2532 Female, age 72, left hemisphere 8.2
2018 Male, age 76, both hemispheres 8.0
1933 Female, age 85, both hemispheres 6.7
2250 Female, age 67, right hemisphere 6.6
2693 Female, age 94, both hemispheres 6.6
1990 Female, age 91, right hemisphere 6.0
2692 Male, age 74, both hemispheres 5.3
1850 Male, age 80, both hemispheres 5.2
Perirhinal gyrus
nTPM: 7.4
1794 Male, age 80, right hemisphere 9.3
2521 Female, age 94, right hemisphere 9.1
1847 Female, age 91, left hemisphere 6.7
2848 Male, age 76, right hemisphere 6.3
1841 Female, age 85, right hemisphere 5.5
Subiculum
nTPM: 6.0
2729 Female, age 91, right hemisphere 8.3
2042 Male, age 76, both hemispheres 7.4
2619 Male, age 74, both hemispheres 6.3
1977 Female, age 85, both hemispheres 6.1
1901 Male, age 80, both hemispheres 5.1
2438 Female, age 94, left hemisphere 2.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.0
Samples: 197

Max nTPM: 46.0
Min nTPM: 8.8
Std nTPM: 5.4
Median nTPM: 20.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 46.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 35.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 34.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 34.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 33.9
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 33.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 31.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 30.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 30.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 30.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 29.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.7
FF:10153-102I9 76 years, female 33.6
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.1
Samples: 4

Max nTPM: 24.6
Min nTPM: 13.3
Sample A Female 24.6
Sample B Female 21.3
Sample C Male 17.3
Sample D Male 13.3
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 20.9
Min nTPM: 16.8
Sample A Female 19.2
Sample B Female 17.2
Sample C Male 20.9
Sample D Male 16.8
Subiculum
nTPM: 18.7
Samples: 4

Max nTPM: 24.7
Min nTPM: 14.6
Sample A Female 24.7
Sample B Female 16.2
Sample C Male 19.2
Sample D Male 14.6
Ventral hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 26.7
Min nTPM: 13.8
Sample A Female 19.7
Sample B Female 13.8
Sample C Male 26.7
Sample D Male 19.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 15.9
Min nTPM: 10.5
Sample A Male 12.4
Sample B Male 12.6
Sample C Female 10.5
Sample D Female 15.9
Hippocampal formation
nTPM: 10.7
Samples: 4

Max nTPM: 11.9
Min nTPM: 7.8
Sample A Male 7.8
Sample B Male 11.9
Sample C Female 11.2
Sample D Female 11.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.3
68743990 Antisense, RP_050203_02_A03, Mouse strain C57BL/6J (56 days, male) 7.3

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