HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:78.6 nTPM
HPA:78.6 nTPM
GTEx:122.2 nTPM
FANTOM5:13.1 Scaled Tags Per Million
Pig:71.6 nTPM
Mouse:76.0 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038816
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 78.6
Sample id Sample description nTPM
Hippocampus
nTPM: 68.8
2529 Female, age 94, left hemisphere 74.2
1898 Male, age 80, left hemisphere 71.1
1911 Female, age 85, right hemisphere 69.2
2621 Female, age 67, right hemisphere 67.9
1855 Male, age 76, left hemisphere 65.5
2148 Female, age 91, left hemisphere 64.7
Dentate gyrus
nTPM: 69.4
2530 Female, age 94, left hemisphere 90.0
2528 Male, age 74, both hemispheres 73.6
2010 Male, age 76, both hemispheres 69.3
2246 Female, age 85, both hemispheres 65.2
2531 Female, age 67, both hemispheres 64.1
1927 Female, age 91, both hemispheres 54.0
Entorhinal gyrus
nTPM: 76.9
2117 Female, age 91, right hemisphere 99.9
2764 Male, age 80, right hemisphere 81.7
2686 Male, age 75, right hemisphere 75.0
2613 Female, age 94, left hemisphere 68.7
1787 Male, age 76, left hemisphere 68.6
1938 Female, age 85, left hemisphere 67.5
Hippocampus, CA1
nTPM: 60.0
2527 Male, age 74, both hemispheres 67.3
2082 Female, age 91, right hemisphere 66.8
1873 Female, age 85, both hemispheres 60.1
2749 Male, age 80, left hemisphere 54.0
2045 Male, age 76, both hemispheres 51.9
Hippocampus, CA2
nTPM: 72.4
1963 Male, age 80, left hemisphere 86.4
1940 Female, age 85, left hemisphere 78.1
2249 Male, age 74, both hemispheres 75.0
2437 Female, age 94, left hemisphere 70.3
2113 Female, age 91, right hemisphere 69.6
1892 Male, age 76, both hemispheres 55.1
Hippocampus, CA3
nTPM: 61.4
1891 Female, age 85, both hemispheres 79.3
2861 Female, age 67, both hemispheres 65.9
1867 Male, age 76, both hemispheres 60.6
2436 Male, age 74, both hemispheres 59.9
2620 Female, age 94, left hemisphere 54.2
2137 Male, age 80, left hemisphere 48.7
Parahippocampal cortex
nTPM: 64.9
2692 Male, age 74, both hemispheres 78.3
2532 Female, age 72, left hemisphere 75.1
1990 Female, age 91, right hemisphere 71.0
1933 Female, age 85, both hemispheres 64.1
2018 Male, age 76, both hemispheres 62.6
2622 Female, age 67, right hemisphere 62.3
2245 Female, age 91, both hemispheres 61.4
1850 Male, age 80, both hemispheres 60.2
2250 Female, age 67, right hemisphere 59.2
2693 Female, age 94, both hemispheres 54.5
Perirhinal gyrus
nTPM: 54.5
2848 Male, age 76, right hemisphere 58.6
1794 Male, age 80, right hemisphere 54.9
2521 Female, age 94, right hemisphere 54.3
1847 Female, age 91, left hemisphere 52.7
1841 Female, age 85, right hemisphere 52.1
Subiculum
nTPM: 78.6
2042 Male, age 76, both hemispheres 92.2
1977 Female, age 85, both hemispheres 80.5
1901 Male, age 80, both hemispheres 80.2
2438 Female, age 94, left hemisphere 78.5
2619 Male, age 74, both hemispheres 71.7
2729 Female, age 91, right hemisphere 68.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 122.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 122.2
Samples: 197

Max nTPM: 407.9
Min nTPM: 35.8
Std nTPM: 65.7
Median nTPM: 106.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 407.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 407.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 353.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 335.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 307.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 301.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 276.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 274.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 265.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 255.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 241.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.1
FF:10169-103B7 60 years, female 15.6
FF:10153-102I9 76 years, female 10.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 71.6
Samples: 4

Max nTPM: 100.4
Min nTPM: 43.2
Sample A Female 100.4
Sample B Female 56.9
Sample C Male 85.9
Sample D Male 43.2
Entorhinal cortex
nTPM: 59.8
Samples: 4

Max nTPM: 75.5
Min nTPM: 51.2
Sample A Female 51.8
Sample B Female 75.5
Sample C Male 60.7
Sample D Male 51.2
Subiculum
nTPM: 57.2
Samples: 4

Max nTPM: 76.7
Min nTPM: 45.8
Sample A Female 76.7
Sample B Female 56.7
Sample C Male 49.6
Sample D Male 45.8
Ventral hippocampus
nTPM: 63.6
Samples: 4

Max nTPM: 76.6
Min nTPM: 49.2
Sample A Female 64.7
Sample B Female 49.2
Sample C Male 76.6
Sample D Male 63.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 76.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 76.0
Samples: 4

Max nTPM: 91.3
Min nTPM: 63.1
Sample A Male 91.3
Sample B Male 82.9
Sample C Female 63.1
Sample D Female 66.5
Hippocampal formation
nTPM: 70.1
Samples: 4

Max nTPM: 78.9
Min nTPM: 59.4
Sample A Male 74.4
Sample B Male 67.7
Sample C Female 59.4
Sample D Female 78.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
68269063 Antisense, RP_041208_01_H02, Mouse strain C57BL/6J (56 days, male) 2.1

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