HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.2 nTPM
HPA:33.2 nTPM
GTEx:25.6 nTPM
FANTOM5:26.3 Scaled Tags Per Million
Pig:13.6 nTPM
Mouse:14.6 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037601
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.2
Sample id Sample description nTPM
Hippocampus
nTPM: 33.2
2529 Female, age 94, left hemisphere 42.6
1855 Male, age 76, left hemisphere 35.5
2148 Female, age 91, left hemisphere 33.9
1911 Female, age 85, right hemisphere 31.2
1898 Male, age 80, left hemisphere 28.4
2621 Female, age 67, right hemisphere 27.9
Dentate gyrus
nTPM: 29.1
2530 Female, age 94, left hemisphere 36.3
2528 Male, age 74, both hemispheres 33.8
2246 Female, age 85, both hemispheres 29.0
2010 Male, age 76, both hemispheres 26.8
1927 Female, age 91, both hemispheres 24.7
2531 Female, age 67, both hemispheres 23.9
Entorhinal gyrus
nTPM: 32.4
2117 Female, age 91, right hemisphere 41.5
2686 Male, age 75, right hemisphere 34.2
1787 Male, age 76, left hemisphere 33.2
2764 Male, age 80, right hemisphere 31.0
2613 Female, age 94, left hemisphere 27.6
1938 Female, age 85, left hemisphere 27.1
Hippocampus, CA1
nTPM: 25.9
2527 Male, age 74, both hemispheres 31.1
2082 Female, age 91, right hemisphere 29.9
1873 Female, age 85, both hemispheres 25.5
2045 Male, age 76, both hemispheres 21.6
2749 Male, age 80, left hemisphere 21.3
Hippocampus, CA2
nTPM: 31.2
2437 Female, age 94, left hemisphere 38.4
1940 Female, age 85, left hemisphere 36.7
2113 Female, age 91, right hemisphere 34.0
2249 Male, age 74, both hemispheres 30.9
1963 Male, age 80, left hemisphere 28.0
1892 Male, age 76, both hemispheres 19.1
Hippocampus, CA3
nTPM: 27.8
2861 Female, age 67, both hemispheres 32.9
2436 Male, age 74, both hemispheres 32.7
1891 Female, age 85, both hemispheres 32.3
1867 Male, age 76, both hemispheres 24.6
2620 Female, age 94, left hemisphere 23.9
2137 Male, age 80, left hemisphere 20.1
Parahippocampal cortex
nTPM: 28.6
2622 Female, age 67, right hemisphere 38.7
2692 Male, age 74, both hemispheres 34.4
2250 Female, age 67, right hemisphere 33.6
1990 Female, age 91, right hemisphere 28.1
2018 Male, age 76, both hemispheres 27.7
1933 Female, age 85, both hemispheres 27.3
2245 Female, age 91, both hemispheres 25.0
2532 Female, age 72, left hemisphere 23.8
2693 Female, age 94, both hemispheres 23.8
1850 Male, age 80, both hemispheres 23.6
Perirhinal gyrus
nTPM: 24.0
2521 Female, age 94, right hemisphere 26.8
1794 Male, age 80, right hemisphere 24.9
1847 Female, age 91, left hemisphere 23.6
1841 Female, age 85, right hemisphere 22.4
2848 Male, age 76, right hemisphere 22.3
Subiculum
nTPM: 29.7
2729 Female, age 91, right hemisphere 37.9
2619 Male, age 74, both hemispheres 33.7
2042 Male, age 76, both hemispheres 31.2
1901 Male, age 80, both hemispheres 26.8
1977 Female, age 85, both hemispheres 24.8
2438 Female, age 94, left hemisphere 24.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.6
Samples: 197

Max nTPM: 53.1
Min nTPM: 11.1
Std nTPM: 8.1
Median nTPM: 24.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 53.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 50.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 48.4
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 48.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 45.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 44.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 43.4
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 42.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 42.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 41.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 39.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.3
FF:10153-102I9 76 years, female 40.1
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 14.5
Min nTPM: 7.8
Sample A Female 14.5
Sample B Female 9.4
Sample C Male 12.9
Sample D Male 7.8
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 14.2
Min nTPM: 9.4
Sample A Female 14.2
Sample B Female 11.8
Sample C Male 12.6
Sample D Male 9.4
Subiculum
nTPM: 13.4
Samples: 4

Max nTPM: 15.6
Min nTPM: 12.2
Sample A Female 15.6
Sample B Female 12.2
Sample C Male 13.0
Sample D Male 12.7
Ventral hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 19.1
Min nTPM: 10.2
Sample A Female 13.6
Sample B Female 10.2
Sample C Male 19.1
Sample D Male 11.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.5
Samples: 4

Max nTPM: 14.3
Min nTPM: 9.1
Sample A Male 14.3
Sample B Male 11.8
Sample C Female 10.9
Sample D Female 9.1
Hippocampal formation
nTPM: 14.6
Samples: 4

Max nTPM: 15.9
Min nTPM: 13.7
Sample A Male 14.2
Sample B Male 13.7
Sample C Female 15.9
Sample D Female 14.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
75694364 Antisense, RP_060518_03_F06, Mouse strain C57BL/6J (56 days, male) 0.8

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