COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.7 nTPM
HPA:14.4 nTPM
GTEx:22.7 nTPM
FANTOM5:28.4 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA044316
Endothelial cells Not detected
Glandular cells Not detected
Peripheral nerve/ganglion Not detected



COLON - HPA RNA-seqi
Average nTPM 14.4
overview
Male, age 54 		Colon sample 67
nTPM: 12.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 14.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 21.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 15.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 23.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 14.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 12.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 12.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 10.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 14
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 9.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 12.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 15.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 22.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 22.7
Samples: 373

Max nTPM: 60.3
Min nTPM: 10.3
Std nTPM: 5.8
Median nTPM: 21.8
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 60.3
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 52.2
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 40.8
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 40.5
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 39.4
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 38.2
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 36.9
GTEX-1S5ZA-1426-SM-E6CJQ 20-29 years, male 36.5
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 36.4
GTEX-Y3I4-1126-SM-4TT7Y 50-59 years, male 36.3
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 35.3
Show allShow less
Colon - Transverse
Average nTPM: 20.7
Samples: 406

Max nTPM: 53.7
Min nTPM: 10.4
Std nTPM: 5.8
Median nTPM: 20.0
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 53.7
GTEX-14JIY-3326-SM-6871E 60-69 years, male 51.4
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 50.4
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 42.1
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 40.6
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 40.5
GTEX-OHPN-2026-SM-E9TIA 60-69 years, female 35.9
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 35.6
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 35.3
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 34.7
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 34.7
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 28.4
FF:10014-101C5 62,83,84 years, mixed 28.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.