COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:11.9 nTPM
HPA:10.7 nTPM
GTEx:11.9 nTPM
FANTOM5:14.5 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 10.7
overview
Male, age 54 		Colon sample 67
nTPM: 7.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 10.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 7.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 5.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 10.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 17.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 11.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 10.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 10.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 16.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 11.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 11.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 7.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 11.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 11.9
Samples: 373

Max nTPM: 26.7
Min nTPM: 2.3
Std nTPM: 3.6
Median nTPM: 11.9
GTEX-1RDX4-1926-SM-E6CJJ 50-59 years, female 26.7
GTEX-1N2DV-1826-SM-E6CJ5 40-49 years, male 23.2
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 22.1
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 20.8
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 20.3
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 19.8
GTEX-1I1GR-2226-SM-ARL7F 60-69 years, male 19.8
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 19.6
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 19.2
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 19.2
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 19.2
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Colon - Transverse
Average nTPM: 10.6
Samples: 406

Max nTPM: 25.2
Min nTPM: 2.3
Std nTPM: 3.4
Median nTPM: 10.7
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 25.2
GTEX-OXRN-2026-SM-E6CHK 50-59 years, male 22.1
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 21.3
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 18.6
GTEX-WHSB-0926-SM-4M1XJ 50-59 years, male 18.3
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 18.0
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 17.8
GTEX-15SB6-1226-SM-7KUMP 50-59 years, female 17.8
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 17.2
GTEX-1B8KZ-1326-SM-7DUG6 50-59 years, male 17.1
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 17.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 14.5
FF:10014-101C5 62,83,84 years, mixed 14.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.