HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.3 nTPM
HPA:51.3 nTPM
GTEx:35.0 nTPM
FANTOM5:29.0 Scaled Tags Per Million
Pig:58.8 nTPM
Mouse:44.4 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051514
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.3
Sample id Sample description nTPM
Hippocampus
nTPM: 51.3
2529 Female, age 94, left hemisphere 59.9
2148 Female, age 91, left hemisphere 55.3
1911 Female, age 85, right hemisphere 54.5
1898 Male, age 80, left hemisphere 50.5
2621 Female, age 67, right hemisphere 43.7
1855 Male, age 76, left hemisphere 43.6
Dentate gyrus
nTPM: 46.2
2246 Female, age 85, both hemispheres 51.2
2528 Male, age 74, both hemispheres 50.8
2530 Female, age 94, left hemisphere 47.1
2010 Male, age 76, both hemispheres 46.0
2531 Female, age 67, both hemispheres 41.8
1927 Female, age 91, both hemispheres 40.4
Entorhinal gyrus
nTPM: 47.5
2117 Female, age 91, right hemisphere 60.8
1938 Female, age 85, left hemisphere 51.4
1787 Male, age 76, left hemisphere 46.9
2764 Male, age 80, right hemisphere 46.9
2613 Female, age 94, left hemisphere 39.9
2686 Male, age 75, right hemisphere 39.4
Hippocampus, CA1
nTPM: 51.1
2527 Male, age 74, both hemispheres 60.5
2082 Female, age 91, right hemisphere 52.6
2749 Male, age 80, left hemisphere 49.9
1873 Female, age 85, both hemispheres 47.3
2045 Male, age 76, both hemispheres 45.3
Hippocampus, CA2
nTPM: 47.9
2249 Male, age 74, both hemispheres 53.5
2113 Female, age 91, right hemisphere 52.9
1940 Female, age 85, left hemisphere 49.3
1963 Male, age 80, left hemisphere 48.8
2437 Female, age 94, left hemisphere 45.2
1892 Male, age 76, both hemispheres 38.0
Hippocampus, CA3
nTPM: 47.1
2436 Male, age 74, both hemispheres 55.6
1891 Female, age 85, both hemispheres 51.1
2137 Male, age 80, left hemisphere 48.6
2861 Female, age 67, both hemispheres 43.0
2620 Female, age 94, left hemisphere 42.5
1867 Male, age 76, both hemispheres 41.7
Parahippocampal cortex
nTPM: 46.7
2250 Female, age 67, right hemisphere 53.6
1933 Female, age 85, both hemispheres 49.6
2245 Female, age 91, both hemispheres 49.6
2692 Male, age 74, both hemispheres 48.2
2622 Female, age 67, right hemisphere 46.9
1990 Female, age 91, right hemisphere 46.8
1850 Male, age 80, both hemispheres 45.4
2018 Male, age 76, both hemispheres 44.3
2532 Female, age 72, left hemisphere 43.3
2693 Female, age 94, both hemispheres 39.0
Perirhinal gyrus
nTPM: 46.1
1794 Male, age 80, right hemisphere 54.0
1847 Female, age 91, left hemisphere 50.6
1841 Female, age 85, right hemisphere 45.8
2521 Female, age 94, right hemisphere 44.3
2848 Male, age 76, right hemisphere 35.7
Subiculum
nTPM: 49.7
2729 Female, age 91, right hemisphere 57.0
2619 Male, age 74, both hemispheres 55.8
2438 Female, age 94, left hemisphere 48.8
1977 Female, age 85, both hemispheres 47.3
1901 Male, age 80, both hemispheres 46.3
2042 Male, age 76, both hemispheres 42.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.0
Samples: 197

Max nTPM: 84.0
Min nTPM: 7.7
Std nTPM: 14.0
Median nTPM: 32.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 84.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 82.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 80.3
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 73.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 72.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 71.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 70.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 69.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 66.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 64.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 63.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.0
FF:10153-102I9 76 years, female 42.4
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 55.4
Samples: 4

Max nTPM: 70.1
Min nTPM: 41.7
Sample A Female 70.1
Sample B Female 52.8
Sample C Male 57.1
Sample D Male 41.7
Entorhinal cortex
nTPM: 43.8
Samples: 4

Max nTPM: 50.8
Min nTPM: 33.2
Sample A Female 45.3
Sample B Female 50.8
Sample C Male 45.7
Sample D Male 33.2
Subiculum
nTPM: 56.9
Samples: 4

Max nTPM: 67.4
Min nTPM: 42.9
Sample A Female 67.4
Sample B Female 60.8
Sample C Male 56.6
Sample D Male 42.9
Ventral hippocampus
nTPM: 58.8
Samples: 4

Max nTPM: 74.8
Min nTPM: 50.4
Sample A Female 56.5
Sample B Female 50.4
Sample C Male 74.8
Sample D Male 53.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.0
Samples: 4

Max nTPM: 44.3
Min nTPM: 30.5
Sample A Male 30.5
Sample B Male 31.6
Sample C Female 44.3
Sample D Female 33.7
Hippocampal formation
nTPM: 44.4
Samples: 4

Max nTPM: 55.3
Min nTPM: 39.0
Sample A Male 40.3
Sample B Male 39.0
Sample C Female 55.3
Sample D Female 43.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
1657 Antisense, RP_040604_01_B09, Mouse strain C57BL/6J (56 days, male) 1.3
1658 Antisense, RP_040604_01_B09, Mouse strain C57BL/6J (56 days, male) 1.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.