COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:24.5 nTPM
HPA:24.5 nTPM
GTEx:21.5 nTPM
FANTOM5:39.8 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA016738Antibody HPA016739
Endothelial cells MediumHigh
Glandular cells LowMedium
Peripheral nerve/ganglion HighHigh





COLON - HPA RNA-seqi
Average nTPM 24.5
overview
Male, age 54 		Colon sample 67
nTPM: 23.5
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 26.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 25.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 27.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 23.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 24.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 28.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 20.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 24.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 27.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 27.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 20.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 19.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 21.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 21.5
Samples: 373

Max nTPM: 66.4
Min nTPM: 8.3
Std nTPM: 9.0
Median nTPM: 19.1
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 66.4
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 59.5
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 57.1
GTEX-1PIIG-2126-SM-EXUSD 30-39 years, male 54.3
GTEX-16Z82-2426-SM-7KUMS 60-69 years, male 53.8
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 51.5
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 48.1
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 47.9
GTEX-1LSVX-2026-SM-E9TJD 60-69 years, male 46.0
GTEX-1HSKV-2326-SM-A9SL9 60-69 years, male 45.6
GTEX-1J8JJ-2426-SM-D4P4A 60-69 years, female 44.2
Show allShow less
Colon - Transverse
Average nTPM: 17.4
Samples: 406

Max nTPM: 63.3
Min nTPM: 7.8
Std nTPM: 6.5
Median nTPM: 15.3
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 63.3
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 54.6
GTEX-1POEN-2026-SM-E6CRL 30-39 years, female 46.3
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 45.0
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 41.7
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 37.9
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 35.6
GTEX-1GZ4I-2426-SM-9WPPP 50-59 years, male 34.7
GTEX-1IGQW-2326-SM-CE6RV 60-69 years, male 34.3
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 34.0
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 33.8
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 39.8
FF:10014-101C5 62,83,84 years, mixed 39.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.