HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:15.3 nTPM
HPA:15.3 nTPM
GTEx:32.2 nTPM
FANTOM5:82.1 Scaled Tags Per Million
Pig:37.7 nTPM
Mouse:19.7 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051916
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.3
Sample id Sample description nTPM
Hippocampus
nTPM: 14.1
1911 Female, age 85, right hemisphere 21.3
2621 Female, age 67, right hemisphere 19.5
2529 Female, age 94, left hemisphere 17.8
2148 Female, age 91, left hemisphere 10.5
1898 Male, age 80, left hemisphere 8.0
1855 Male, age 76, left hemisphere 7.6
Dentate gyrus
nTPM: 10.2
2531 Female, age 67, both hemispheres 14.1
1927 Female, age 91, both hemispheres 14.0
2246 Female, age 85, both hemispheres 9.5
2530 Female, age 94, left hemisphere 8.3
2528 Male, age 74, both hemispheres 8.1
2010 Male, age 76, both hemispheres 7.2
Entorhinal gyrus
nTPM: 11.4
2613 Female, age 94, left hemisphere 16.5
2686 Male, age 75, right hemisphere 13.7
2764 Male, age 80, right hemisphere 11.1
2117 Female, age 91, right hemisphere 10.4
1787 Male, age 76, left hemisphere 8.6
1938 Female, age 85, left hemisphere 8.0
Hippocampus, CA1
nTPM: 13.5
2749 Male, age 80, left hemisphere 22.4
2527 Male, age 74, both hemispheres 17.2
2082 Female, age 91, right hemisphere 10.1
1873 Female, age 85, both hemispheres 9.4
2045 Male, age 76, both hemispheres 8.5
Hippocampus, CA2
nTPM: 9.1
2113 Female, age 91, right hemisphere 11.5
2249 Male, age 74, both hemispheres 10.8
1892 Male, age 76, both hemispheres 9.5
1963 Male, age 80, left hemisphere 9.4
2437 Female, age 94, left hemisphere 8.2
1940 Female, age 85, left hemisphere 5.2
Hippocampus, CA3
nTPM: 15.3
2137 Male, age 80, left hemisphere 26.5
2861 Female, age 67, both hemispheres 17.5
2620 Female, age 94, left hemisphere 14.4
1867 Male, age 76, both hemispheres 13.8
1891 Female, age 85, both hemispheres 11.6
2436 Male, age 74, both hemispheres 7.8
Parahippocampal cortex
nTPM: 12.7
2245 Female, age 91, both hemispheres 23.2
2622 Female, age 67, right hemisphere 20.4
2018 Male, age 76, both hemispheres 11.5
2532 Female, age 72, left hemisphere 11.4
2693 Female, age 94, both hemispheres 11.1
2250 Female, age 67, right hemisphere 10.7
2692 Male, age 74, both hemispheres 10.5
1933 Female, age 85, both hemispheres 9.7
1990 Female, age 91, right hemisphere 9.5
1850 Male, age 80, both hemispheres 8.6
Perirhinal gyrus
nTPM: 9.6
1794 Male, age 80, right hemisphere 10.4
2848 Male, age 76, right hemisphere 10.4
2521 Female, age 94, right hemisphere 9.7
1847 Female, age 91, left hemisphere 9.4
1841 Female, age 85, right hemisphere 8.0
Subiculum
nTPM: 11.0
1901 Male, age 80, both hemispheres 14.4
2042 Male, age 76, both hemispheres 13.8
2438 Female, age 94, left hemisphere 11.4
1977 Female, age 85, both hemispheres 10.1
2619 Male, age 74, both hemispheres 9.7
2729 Female, age 91, right hemisphere 6.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.2
Samples: 197

Max nTPM: 117.8
Min nTPM: 2.5
Std nTPM: 22.5
Median nTPM: 26.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 117.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 107.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 103.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 99.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 98.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 96.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 89.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 89.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 85.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 79.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 77.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.1
FF:10153-102I9 76 years, female 83.7
FF:10169-103B7 60 years, female 80.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 37.7
Samples: 4

Max nTPM: 52.6
Min nTPM: 27.1
Sample A Female 52.6
Sample B Female 39.6
Sample C Male 27.1
Sample D Male 31.4
Entorhinal cortex
nTPM: 18.6
Samples: 4

Max nTPM: 25.5
Min nTPM: 15.6
Sample A Female 15.6
Sample B Female 15.8
Sample C Male 25.5
Sample D Male 17.5
Subiculum
nTPM: 22.4
Samples: 4

Max nTPM: 28.0
Min nTPM: 15.8
Sample A Female 28.0
Sample B Female 21.9
Sample C Male 23.7
Sample D Male 15.8
Ventral hippocampus
nTPM: 33.8
Samples: 4

Max nTPM: 41.0
Min nTPM: 26.2
Sample A Female 30.0
Sample B Female 26.2
Sample C Male 41.0
Sample D Male 38.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.0
Samples: 4

Max nTPM: 21.6
Min nTPM: 16.1
Sample A Male 17.2
Sample B Male 16.1
Sample C Female 21.1
Sample D Female 21.6
Hippocampal formation
nTPM: 19.7
Samples: 4

Max nTPM: 21.9
Min nTPM: 15.5
Sample A Male 20.4
Sample B Male 20.9
Sample C Female 15.5
Sample D Female 21.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
73930839 Antisense, RP_051214_04_D01, Mouse strain C57BL/6J (56 days, male) 3.0
70430892 Antisense, RP_050614_02_C08, Mouse strain C57BL/6J (56 days, male) 2.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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