COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Medium
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.9 nTPM
HPA:11.0 nTPM
GTEx:20.9 nTPM
FANTOM5:23.8 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA021657
Endothelial cells Not detected
Glandular cells Medium
Peripheral nerve/ganglion Low



COLON - HPA RNA-seqi
Average nTPM 11.0
overview
Male, age 54 		Colon sample 67
nTPM: 14.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 6.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 5.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 14.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 16
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 14.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 7.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 6.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 10.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 8.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 9.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 12.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 17.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 20.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 20.9
Samples: 373

Max nTPM: 52.1
Min nTPM: 6.0
Std nTPM: 9.4
Median nTPM: 18.5
GTEX-1EU9M-2726-SM-7P8QD 60-69 years, male 52.1
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 48.1
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 48.0
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 47.9
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 47.4
GTEX-1RLM8-1726-SM-E9TKF 50-59 years, male 47.4
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 45.7
GTEX-16Z82-2426-SM-7KUMS 60-69 years, male 45.6
GTEX-1LSNL-1626-SM-E9TJY 50-59 years, male 43.8
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 43.7
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 42.6
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Colon - Transverse
Average nTPM: 16.8
Samples: 406

Max nTPM: 58.7
Min nTPM: 3.0
Std nTPM: 10.7
Median nTPM: 13.2
GTEX-1IGQW-2326-SM-CE6RV 60-69 years, male 58.7
GTEX-SJXC-2226-SM-EVYAK 60-69 years, male 52.1
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 50.6
GTEX-13QJ3-2626-SM-9OSXQ 50-59 years, male 49.4
GTEX-1LSVX-1726-SM-DHXJP 60-69 years, male 46.7
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 46.6
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 46.2
GTEX-1S5VW-2926-SM-E9U6H 60-69 years, male 45.9
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 45.7
GTEX-16Z82-2226-SM-6LPJ7 60-69 years, male 44.9
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 44.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 23.8
FF:10014-101C5 62,83,84 years, mixed 23.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.