HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
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Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:784.4 nTPM
HPA:784.4 nTPM
GTEx:802.6 nTPM
FANTOM5:1250.6 Scaled Tags Per Million
Mouse:1961.2 nTPM
Allen mouse:36.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039247Antibody HPA043684Antibody HPA063394Antibody CAB008686
Glial cells MediumNot detectedNot detectedNot detected
Neuronal cells HighHighMediumMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 784.4
Sample id Sample description nTPM
Hippocampus
nTPM: 766.4
2529 Female, age 94, left hemisphere 846.7
1898 Male, age 80, left hemisphere 822.5
1911 Female, age 85, right hemisphere 742.5
1855 Male, age 76, left hemisphere 740.6
2621 Female, age 67, right hemisphere 737.7
2148 Female, age 91, left hemisphere 708.2
Dentate gyrus
nTPM: 766.0
2010 Male, age 76, both hemispheres 814.1
2528 Male, age 74, both hemispheres 812.0
2530 Female, age 94, left hemisphere 804.3
2246 Female, age 85, both hemispheres 743.8
1927 Female, age 91, both hemispheres 719.2
2531 Female, age 67, both hemispheres 702.6
Entorhinal gyrus
nTPM: 744.0
2764 Male, age 80, right hemisphere 803.5
2117 Female, age 91, right hemisphere 802.8
1938 Female, age 85, left hemisphere 749.7
1787 Male, age 76, left hemisphere 739.9
2613 Female, age 94, left hemisphere 690.0
2686 Male, age 75, right hemisphere 678.0
Hippocampus, CA1
nTPM: 753.3
2749 Male, age 80, left hemisphere 860.7
2527 Male, age 74, both hemispheres 745.2
2045 Male, age 76, both hemispheres 731.0
1873 Female, age 85, both hemispheres 729.3
2082 Female, age 91, right hemisphere 700.5
Hippocampus, CA2
nTPM: 763.7
2249 Male, age 74, both hemispheres 866.9
1963 Male, age 80, left hemisphere 788.4
1892 Male, age 76, both hemispheres 759.9
2437 Female, age 94, left hemisphere 742.2
1940 Female, age 85, left hemisphere 719.5
2113 Female, age 91, right hemisphere 705.3
Hippocampus, CA3
nTPM: 739.6
2137 Male, age 80, left hemisphere 800.4
1891 Female, age 85, both hemispheres 771.0
2620 Female, age 94, left hemisphere 754.1
1867 Male, age 76, both hemispheres 744.0
2436 Male, age 74, both hemispheres 743.8
2861 Female, age 67, both hemispheres 624.2
Parahippocampal cortex
nTPM: 716.9
2532 Female, age 72, left hemisphere 769.6
1850 Male, age 80, both hemispheres 768.3
1933 Female, age 85, both hemispheres 755.3
1990 Female, age 91, right hemisphere 741.7
2245 Female, age 91, both hemispheres 735.6
2250 Female, age 67, right hemisphere 713.7
2692 Male, age 74, both hemispheres 710.6
2018 Male, age 76, both hemispheres 689.2
2693 Female, age 94, both hemispheres 670.8
2622 Female, age 67, right hemisphere 613.9
Perirhinal gyrus
nTPM: 738.7
1794 Male, age 80, right hemisphere 762.7
2521 Female, age 94, right hemisphere 755.4
1847 Female, age 91, left hemisphere 736.2
1841 Female, age 85, right hemisphere 724.3
2848 Male, age 76, right hemisphere 715.0
Subiculum
nTPM: 784.4
1901 Male, age 80, both hemispheres 847.9
1977 Female, age 85, both hemispheres 836.5
2042 Male, age 76, both hemispheres 822.1
2438 Female, age 94, left hemisphere 763.6
2729 Female, age 91, right hemisphere 721.0
2619 Male, age 74, both hemispheres 715.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 802.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 802.6
Samples: 197

Max nTPM: 2139.1
Min nTPM: 258.2
Std nTPM: 317.6
Median nTPM: 760.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 2139.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 1858.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1779.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 1747.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 1745.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1663.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 1486.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 1411.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 1402.7
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 1385.2
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 1353.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1250.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1250.6
FF:10169-103B7 60 years, female 1710.7
FF:10153-102I9 76 years, female 790.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1961.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1961.2
Samples: 4

Max nTPM: 2318.2
Min nTPM: 1691.7
Sample A Male 1691.7
Sample B Male 1880.7
Sample C Female 1954.1
Sample D Female 2318.2
Hippocampal formation
nTPM: 1816.2
Samples: 4

Max nTPM: 2024.5
Min nTPM: 1565.2
Sample A Male 2024.5
Sample B Male 1565.2
Sample C Female 1864.3
Sample D Female 1810.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 36.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 36.1
68844164 Antisense, RP_050222_01_A07, Mouse strain C57BL/6J (56 days, male) 36.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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