HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:91.6 nTPM
HPA:91.6 nTPM
GTEx:110.8 nTPM
FANTOM5:185.3 Scaled Tags Per Million
Pig:53.0 nTPM
Mouse:186.2 nTPM
Allen mouse:11.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045211Antibody HPA075051
Glial cells Not detectedMedium
Neuronal cells LowMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 91.6
Sample id Sample description nTPM
Hippocampus
nTPM: 82.7
1898 Male, age 80, left hemisphere 97.2
2529 Female, age 94, left hemisphere 83.4
2148 Female, age 91, left hemisphere 82.4
2621 Female, age 67, right hemisphere 79.4
1855 Male, age 76, left hemisphere 77.9
1911 Female, age 85, right hemisphere 75.6
Dentate gyrus
nTPM: 81.9
1927 Female, age 91, both hemispheres 87.4
2010 Male, age 76, both hemispheres 86.9
2530 Female, age 94, left hemisphere 86.4
2528 Male, age 74, both hemispheres 83.3
2246 Female, age 85, both hemispheres 76.5
2531 Female, age 67, both hemispheres 70.9
Entorhinal gyrus
nTPM: 87.7
2764 Male, age 80, right hemisphere 100.5
1938 Female, age 85, left hemisphere 88.3
1787 Male, age 76, left hemisphere 86.5
2117 Female, age 91, right hemisphere 84.3
2686 Male, age 75, right hemisphere 83.8
2613 Female, age 94, left hemisphere 83.0
Hippocampus, CA1
nTPM: 88.9
2749 Male, age 80, left hemisphere 111.0
1873 Female, age 85, both hemispheres 86.2
2527 Male, age 74, both hemispheres 86.0
2082 Female, age 91, right hemisphere 81.7
2045 Male, age 76, both hemispheres 79.3
Hippocampus, CA2
nTPM: 87.0
1963 Male, age 80, left hemisphere 97.1
1892 Male, age 76, both hemispheres 94.4
2249 Male, age 74, both hemispheres 91.3
2113 Female, age 91, right hemisphere 80.5
1940 Female, age 85, left hemisphere 79.8
2437 Female, age 94, left hemisphere 78.8
Hippocampus, CA3
nTPM: 85.7
2436 Male, age 74, both hemispheres 98.2
2137 Male, age 80, left hemisphere 91.4
1867 Male, age 76, both hemispheres 87.9
2620 Female, age 94, left hemisphere 82.1
1891 Female, age 85, both hemispheres 81.4
2861 Female, age 67, both hemispheres 73.5
Parahippocampal cortex
nTPM: 84.8
1850 Male, age 80, both hemispheres 95.7
1990 Female, age 91, right hemisphere 90.0
2250 Female, age 67, right hemisphere 86.9
1933 Female, age 85, both hemispheres 86.0
2245 Female, age 91, both hemispheres 84.6
2532 Female, age 72, left hemisphere 82.5
2692 Male, age 74, both hemispheres 82.5
2622 Female, age 67, right hemisphere 81.0
2018 Male, age 76, both hemispheres 80.6
2693 Female, age 94, both hemispheres 77.9
Perirhinal gyrus
nTPM: 91.6
1847 Female, age 91, left hemisphere 100.4
1794 Male, age 80, right hemisphere 99.2
1841 Female, age 85, right hemisphere 89.8
2848 Male, age 76, right hemisphere 85.5
2521 Female, age 94, right hemisphere 83.0
Subiculum
nTPM: 81.5
1901 Male, age 80, both hemispheres 89.1
1977 Female, age 85, both hemispheres 88.7
2619 Male, age 74, both hemispheres 85.0
2042 Male, age 76, both hemispheres 79.0
2729 Female, age 91, right hemisphere 78.1
2438 Female, age 94, left hemisphere 69.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 110.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 110.8
Samples: 197

Max nTPM: 196.7
Min nTPM: 44.2
Std nTPM: 26.2
Median nTPM: 105.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 196.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 180.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 177.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 176.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 169.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 161.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 160.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 159.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 159.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 157.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 155.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 185.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 185.3
FF:10169-103B7 60 years, female 228.1
FF:10153-102I9 76 years, female 142.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 53.1
Samples: 4

Max nTPM: 73.9
Min nTPM: 37.6
Sample A Female 73.9
Sample B Female 50.1
Sample C Male 50.6
Sample D Male 37.6
Entorhinal cortex
nTPM: 45.5
Samples: 4

Max nTPM: 53.7
Min nTPM: 36.1
Sample A Female 48.6
Sample B Female 53.7
Sample C Male 43.7
Sample D Male 36.1
Subiculum
nTPM: 43.6
Samples: 4

Max nTPM: 58.7
Min nTPM: 35.4
Sample A Female 58.7
Sample B Female 38.6
Sample C Male 41.6
Sample D Male 35.4
Ventral hippocampus
nTPM: 51.0
Samples: 4

Max nTPM: 62.2
Min nTPM: 31.7
Sample A Female 55.7
Sample B Female 31.7
Sample C Male 62.2
Sample D Male 54.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 186.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 184.0
Samples: 4

Max nTPM: 191.4
Min nTPM: 178.2
Sample A Male 178.2
Sample B Male 191.4
Sample C Female 186.6
Sample D Female 179.8
Hippocampal formation
nTPM: 186.2
Samples: 4

Max nTPM: 193.6
Min nTPM: 175.5
Sample A Male 193.6
Sample B Male 175.5
Sample C Female 188.8
Sample D Female 186.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
69015572 Antisense, RP_050315_01_C05, Mouse strain C57BL/6J (56 days, male) 11.1

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