HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:34.8 nTPM
HPA:34.8 nTPM
GTEx:29.6 nTPM
FANTOM5:105.5 Scaled Tags Per Million
Pig:30.4 nTPM
Mouse:46.2 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023303
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.8
Sample id Sample description nTPM
Hippocampus
nTPM: 22.1
1898 Male, age 80, left hemisphere 25.0
2529 Female, age 94, left hemisphere 23.5
1855 Male, age 76, left hemisphere 22.2
1911 Female, age 85, right hemisphere 21.5
2621 Female, age 67, right hemisphere 20.8
2148 Female, age 91, left hemisphere 19.6
Dentate gyrus
nTPM: 22.1
1927 Female, age 91, both hemispheres 25.1
2530 Female, age 94, left hemisphere 22.2
2010 Male, age 76, both hemispheres 22.1
2246 Female, age 85, both hemispheres 21.6
2528 Male, age 74, both hemispheres 20.9
2531 Female, age 67, both hemispheres 20.5
Entorhinal gyrus
nTPM: 22.5
2764 Male, age 80, right hemisphere 24.2
1787 Male, age 76, left hemisphere 23.4
1938 Female, age 85, left hemisphere 22.9
2117 Female, age 91, right hemisphere 22.5
2686 Male, age 75, right hemisphere 21.8
2613 Female, age 94, left hemisphere 20.4
Hippocampus, CA1
nTPM: 23.3
2749 Male, age 80, left hemisphere 24.6
2527 Male, age 74, both hemispheres 24.2
1873 Female, age 85, both hemispheres 23.3
2045 Male, age 76, both hemispheres 22.8
2082 Female, age 91, right hemisphere 21.6
Hippocampus, CA2
nTPM: 23.1
1892 Male, age 76, both hemispheres 26.3
1963 Male, age 80, left hemisphere 23.1
1940 Female, age 85, left hemisphere 22.5
2249 Male, age 74, both hemispheres 22.5
2113 Female, age 91, right hemisphere 22.2
2437 Female, age 94, left hemisphere 21.9
Hippocampus, CA3
nTPM: 22.6
1867 Male, age 76, both hemispheres 24.5
2137 Male, age 80, left hemisphere 24.4
1891 Female, age 85, both hemispheres 22.7
2436 Male, age 74, both hemispheres 22.1
2620 Female, age 94, left hemisphere 21.2
2861 Female, age 67, both hemispheres 20.9
Parahippocampal cortex
nTPM: 23.1
1850 Male, age 80, both hemispheres 27.6
2622 Female, age 67, right hemisphere 23.8
1990 Female, age 91, right hemisphere 23.7
2532 Female, age 72, left hemisphere 22.9
2018 Male, age 76, both hemispheres 22.7
1933 Female, age 85, both hemispheres 22.6
2245 Female, age 91, both hemispheres 22.5
2692 Male, age 74, both hemispheres 22.3
2693 Female, age 94, both hemispheres 22.0
2250 Female, age 67, right hemisphere 20.7
Perirhinal gyrus
nTPM: 25.7
1794 Male, age 80, right hemisphere 27.3
1841 Female, age 85, right hemisphere 27.0
1847 Female, age 91, left hemisphere 26.4
2848 Male, age 76, right hemisphere 25.1
2521 Female, age 94, right hemisphere 22.7
Subiculum
nTPM: 34.8
2438 Female, age 94, left hemisphere 98.0
1901 Male, age 80, both hemispheres 22.9
1977 Female, age 85, both hemispheres 22.7
2619 Male, age 74, both hemispheres 22.4
2729 Female, age 91, right hemisphere 21.7
2042 Male, age 76, both hemispheres 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.6
Samples: 197

Max nTPM: 47.3
Min nTPM: 15.8
Std nTPM: 4.4
Median nTPM: 29.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 47.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 41.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 41.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 40.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 40.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 40.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 40.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 39.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 38.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 38.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 37.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 105.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 105.5
FF:10153-102I9 76 years, female 121.0
FF:10169-103B7 60 years, female 89.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 39.5
Min nTPM: 24.9
Sample A Female 39.5
Sample B Female 28.4
Sample C Male 28.6
Sample D Male 24.9
Entorhinal cortex
nTPM: 26.0
Samples: 4

Max nTPM: 30.7
Min nTPM: 22.3
Sample A Female 30.7
Sample B Female 26.2
Sample C Male 24.8
Sample D Male 22.3
Subiculum
nTPM: 27.2
Samples: 4

Max nTPM: 38.7
Min nTPM: 21.7
Sample A Female 38.7
Sample B Female 24.4
Sample C Male 23.9
Sample D Male 21.7
Ventral hippocampus
nTPM: 29.5
Samples: 4

Max nTPM: 33.4
Min nTPM: 21.2
Sample A Female 30.0
Sample B Female 21.2
Sample C Male 33.4
Sample D Male 33.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.2
Samples: 4

Max nTPM: 48.7
Min nTPM: 43.7
Sample A Male 43.7
Sample B Male 46.7
Sample C Female 45.7
Sample D Female 48.7
Hippocampal formation
nTPM: 45.5
Samples: 4

Max nTPM: 48.6
Min nTPM: 42.9
Sample A Male 42.9
Sample B Male 46.8
Sample C Female 48.6
Sample D Female 43.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
70474023 Antisense, RP_050614_04_G04, Mouse strain C57BL/6J (56 days, male) 2.9

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