HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:60.7 nTPM
HPA:60.7 nTPM
GTEx:68.8 nTPM
FANTOM5:13.9 Scaled Tags Per Million
Pig:43.6 nTPM
Mouse:26.2 nTPM
Allen mouse:7.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.7
Sample id Sample description nTPM
Hippocampus
nTPM: 56.3
2621 Female, age 67, right hemisphere 64.9
2148 Female, age 91, left hemisphere 61.9
1898 Male, age 80, left hemisphere 60.0
1855 Male, age 76, left hemisphere 52.0
1911 Female, age 85, right hemisphere 51.6
2529 Female, age 94, left hemisphere 47.2
Dentate gyrus
nTPM: 56.9
1927 Female, age 91, both hemispheres 64.9
2530 Female, age 94, left hemisphere 61.3
2010 Male, age 76, both hemispheres 58.9
2528 Male, age 74, both hemispheres 53.0
2246 Female, age 85, both hemispheres 52.5
2531 Female, age 67, both hemispheres 50.9
Entorhinal gyrus
nTPM: 56.5
2613 Female, age 94, left hemisphere 71.3
1938 Female, age 85, left hemisphere 56.9
2764 Male, age 80, right hemisphere 56.7
1787 Male, age 76, left hemisphere 55.4
2686 Male, age 75, right hemisphere 51.3
2117 Female, age 91, right hemisphere 47.5
Hippocampus, CA1
nTPM: 60.7
2749 Male, age 80, left hemisphere 84.5
1873 Female, age 85, both hemispheres 64.2
2527 Male, age 74, both hemispheres 58.1
2082 Female, age 91, right hemisphere 48.8
2045 Male, age 76, both hemispheres 47.6
Hippocampus, CA2
nTPM: 57.8
1963 Male, age 80, left hemisphere 80.0
1892 Male, age 76, both hemispheres 63.2
2249 Male, age 74, both hemispheres 52.9
2437 Female, age 94, left hemisphere 52.1
2113 Female, age 91, right hemisphere 50.4
1940 Female, age 85, left hemisphere 48.1
Hippocampus, CA3
nTPM: 53.7
2137 Male, age 80, left hemisphere 61.0
2861 Female, age 67, both hemispheres 60.3
1867 Male, age 76, both hemispheres 51.8
2436 Male, age 74, both hemispheres 51.6
1891 Female, age 85, both hemispheres 49.7
2620 Female, age 94, left hemisphere 47.7
Parahippocampal cortex
nTPM: 52.5
2622 Female, age 67, right hemisphere 55.3
1990 Female, age 91, right hemisphere 54.5
1850 Male, age 80, both hemispheres 54.3
2245 Female, age 91, both hemispheres 53.5
1933 Female, age 85, both hemispheres 53.2
2692 Male, age 74, both hemispheres 53.1
2250 Female, age 67, right hemisphere 52.6
2693 Female, age 94, both hemispheres 51.1
2532 Female, age 72, left hemisphere 50.4
2018 Male, age 76, both hemispheres 47.0
Perirhinal gyrus
nTPM: 54.6
1847 Female, age 91, left hemisphere 64.3
1794 Male, age 80, right hemisphere 56.1
2848 Male, age 76, right hemisphere 51.8
1841 Female, age 85, right hemisphere 50.8
2521 Female, age 94, right hemisphere 49.8
Subiculum
nTPM: 51.1
1901 Male, age 80, both hemispheres 53.9
1977 Female, age 85, both hemispheres 52.6
2438 Female, age 94, left hemisphere 52.0
2619 Male, age 74, both hemispheres 50.3
2729 Female, age 91, right hemisphere 49.4
2042 Male, age 76, both hemispheres 48.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.8
Samples: 197

Max nTPM: 244.0
Min nTPM: 2.3
Std nTPM: 46.2
Median nTPM: 58.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 244.0
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 238.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 230.7
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 212.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 198.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 194.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 189.3
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 188.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 175.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 160.8
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 159.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.9
FF:10169-103B7 60 years, female 14.6
FF:10153-102I9 76 years, female 13.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 43.6
Samples: 4

Max nTPM: 67.8
Min nTPM: 23.6
Sample A Female 67.8
Sample B Female 49.5
Sample C Male 33.4
Sample D Male 23.6
Entorhinal cortex
nTPM: 18.6
Samples: 4

Max nTPM: 21.9
Min nTPM: 11.7
Sample A Female 11.7
Sample B Female 20.6
Sample C Male 21.9
Sample D Male 20.3
Subiculum
nTPM: 23.3
Samples: 4

Max nTPM: 30.3
Min nTPM: 16.9
Sample A Female 30.3
Sample B Female 20.2
Sample C Male 25.7
Sample D Male 16.9
Ventral hippocampus
nTPM: 36.8
Samples: 4

Max nTPM: 54.7
Min nTPM: 22.6
Sample A Female 34.8
Sample B Female 22.6
Sample C Male 35.2
Sample D Male 54.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.1
Samples: 4

Max nTPM: 28.4
Min nTPM: 20.2
Sample A Male 20.2
Sample B Male 28.4
Sample C Female 27.5
Sample D Female 24.3
Hippocampal formation
nTPM: 26.2
Samples: 4

Max nTPM: 32.5
Min nTPM: 19.8
Sample A Male 32.5
Sample B Male 24.4
Sample C Female 19.8
Sample D Female 27.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.7
69817817 Antisense, RP_050510_03_G12, Mouse strain C57BL/6J (56 days, male) 7.7

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