HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.4 nTPM
HPA:32.4 nTPM
GTEx:39.2 nTPM
FANTOM5:79.0 Scaled Tags Per Million
Pig:6.9 nTPM
Mouse:25.6 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041841Antibody HPA068631Antibody CAB019935
Glial cells LowNot detectedNot detected
Neuronal cells LowMediumLow






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.4
Sample id Sample description nTPM
Hippocampus
nTPM: 31.8
2621 Female, age 67, right hemisphere 33.4
1898 Male, age 80, left hemisphere 32.2
2148 Female, age 91, left hemisphere 31.9
2529 Female, age 94, left hemisphere 31.4
1855 Male, age 76, left hemisphere 31.1
1911 Female, age 85, right hemisphere 30.7
Dentate gyrus
nTPM: 32.4
2530 Female, age 94, left hemisphere 39.1
2528 Male, age 74, both hemispheres 31.9
1927 Female, age 91, both hemispheres 31.8
2531 Female, age 67, both hemispheres 31.3
2010 Male, age 76, both hemispheres 30.8
2246 Female, age 85, both hemispheres 29.2
Entorhinal gyrus
nTPM: 30.5
2613 Female, age 94, left hemisphere 33.6
2764 Male, age 80, right hemisphere 32.1
1787 Male, age 76, left hemisphere 31.6
1938 Female, age 85, left hemisphere 30.9
2686 Male, age 75, right hemisphere 27.8
2117 Female, age 91, right hemisphere 27.3
Hippocampus, CA1
nTPM: 31.2
2749 Male, age 80, left hemisphere 36.8
2527 Male, age 74, both hemispheres 31.8
1873 Female, age 85, both hemispheres 31.0
2082 Female, age 91, right hemisphere 28.3
2045 Male, age 76, both hemispheres 28.1
Hippocampus, CA2
nTPM: 32.2
2437 Female, age 94, left hemisphere 36.2
1892 Male, age 76, both hemispheres 34.5
1963 Male, age 80, left hemisphere 34.1
2249 Male, age 74, both hemispheres 30.3
1940 Female, age 85, left hemisphere 29.5
2113 Female, age 91, right hemisphere 28.7
Hippocampus, CA3
nTPM: 31.6
2861 Female, age 67, both hemispheres 37.2
2137 Male, age 80, left hemisphere 32.9
2620 Female, age 94, left hemisphere 30.8
2436 Male, age 74, both hemispheres 30.6
1867 Male, age 76, both hemispheres 29.9
1891 Female, age 85, both hemispheres 28.4
Parahippocampal cortex
nTPM: 30.2
2622 Female, age 67, right hemisphere 34.2
2245 Female, age 91, both hemispheres 32.3
2532 Female, age 72, left hemisphere 31.1
1850 Male, age 80, both hemispheres 30.8
1933 Female, age 85, both hemispheres 30.8
1990 Female, age 91, right hemisphere 29.6
2250 Female, age 67, right hemisphere 29.6
2692 Male, age 74, both hemispheres 29.6
2693 Female, age 94, both hemispheres 27.7
2018 Male, age 76, both hemispheres 26.9
Perirhinal gyrus
nTPM: 31.0
1794 Male, age 80, right hemisphere 34.3
1847 Female, age 91, left hemisphere 30.3
1841 Female, age 85, right hemisphere 30.2
2848 Male, age 76, right hemisphere 30.1
2521 Female, age 94, right hemisphere 29.9
Subiculum
nTPM: 29.1
2438 Female, age 94, left hemisphere 30.8
2619 Male, age 74, both hemispheres 30.8
2729 Female, age 91, right hemisphere 28.9
1901 Male, age 80, both hemispheres 28.7
1977 Female, age 85, both hemispheres 28.5
2042 Male, age 76, both hemispheres 27.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.2
Samples: 197

Max nTPM: 86.4
Min nTPM: 9.2
Std nTPM: 12.1
Median nTPM: 38.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 86.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 79.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 71.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 66.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 64.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 63.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 62.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 61.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 61.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 61.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 60.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.0
FF:10169-103B7 60 years, female 103.5
FF:10153-102I9 76 years, female 54.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.3
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.7
Sample A Female 7.2
Sample B Female 6.4
Sample C Male 6.0
Sample D Male 5.7
Entorhinal cortex
nTPM: 6.1
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.8
Sample A Female 6.5
Sample B Female 5.9
Sample C Male 6.3
Sample D Male 5.8
Subiculum
nTPM: 5.9
Samples: 4

Max nTPM: 7.1
Min nTPM: 5.1
Sample A Female 7.1
Sample B Female 5.1
Sample C Male 5.9
Sample D Male 5.4
Ventral hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 8.3
Min nTPM: 5.1
Sample A Female 6.9
Sample B Female 5.1
Sample C Male 8.3
Sample D Male 7.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.6
Samples: 4

Max nTPM: 26.9
Min nTPM: 24.6
Sample A Male 24.6
Sample B Male 25.6
Sample C Female 25.2
Sample D Female 26.9
Hippocampal formation
nTPM: 25.2
Samples: 4

Max nTPM: 29.5
Min nTPM: 21.5
Sample A Male 29.5
Sample B Male 23.4
Sample C Female 21.5
Sample D Female 26.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
69059955 Antisense, RP_050317_04_G03, Mouse strain C57BL/6J (56 days, male) 1.9

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