HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:75.1 nTPM
HPA:75.1 nTPM
GTEx:72.0 nTPM
FANTOM5:43.0 Scaled Tags Per Million
Pig:23.6 nTPM
Mouse:190.3 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053000
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.1
Sample id Sample description nTPM
Hippocampus
nTPM: 75.1
1898 Male, age 80, left hemisphere 77.1
1855 Male, age 76, left hemisphere 76.7
2529 Female, age 94, left hemisphere 76.0
1911 Female, age 85, right hemisphere 75.7
2148 Female, age 91, left hemisphere 73.0
2621 Female, age 67, right hemisphere 72.2
Dentate gyrus
nTPM: 73.1
2010 Male, age 76, both hemispheres 77.7
2528 Male, age 74, both hemispheres 75.1
1927 Female, age 91, both hemispheres 72.4
2530 Female, age 94, left hemisphere 72.0
2246 Female, age 85, both hemispheres 71.5
2531 Female, age 67, both hemispheres 69.8
Entorhinal gyrus
nTPM: 72.4
2117 Female, age 91, right hemisphere 76.8
1938 Female, age 85, left hemisphere 74.4
1787 Male, age 76, left hemisphere 73.2
2764 Male, age 80, right hemisphere 72.2
2686 Male, age 75, right hemisphere 70.0
2613 Female, age 94, left hemisphere 67.5
Hippocampus, CA1
nTPM: 74.2
2527 Male, age 74, both hemispheres 75.5
1873 Female, age 85, both hemispheres 74.8
2045 Male, age 76, both hemispheres 74.7
2749 Male, age 80, left hemisphere 73.8
2082 Female, age 91, right hemisphere 72.1
Hippocampus, CA2
nTPM: 75.1
2249 Male, age 74, both hemispheres 80.2
1892 Male, age 76, both hemispheres 75.6
1963 Male, age 80, left hemisphere 74.7
2113 Female, age 91, right hemisphere 73.6
1940 Female, age 85, left hemisphere 73.3
2437 Female, age 94, left hemisphere 73.0
Hippocampus, CA3
nTPM: 73.2
1891 Female, age 85, both hemispheres 77.7
2436 Male, age 74, both hemispheres 75.9
1867 Male, age 76, both hemispheres 75.4
2620 Female, age 94, left hemisphere 71.4
2137 Male, age 80, left hemisphere 70.6
2861 Female, age 67, both hemispheres 68.0
Parahippocampal cortex
nTPM: 72.4
1933 Female, age 85, both hemispheres 75.8
2018 Male, age 76, both hemispheres 74.8
1850 Male, age 80, both hemispheres 73.5
1990 Female, age 91, right hemisphere 73.2
2250 Female, age 67, right hemisphere 73.1
2532 Female, age 72, left hemisphere 71.8
2692 Male, age 74, both hemispheres 71.4
2693 Female, age 94, both hemispheres 71.0
2245 Female, age 91, both hemispheres 70.5
2622 Female, age 67, right hemisphere 68.6
Perirhinal gyrus
nTPM: 73.5
1841 Female, age 85, right hemisphere 74.8
1847 Female, age 91, left hemisphere 74.5
1794 Male, age 80, right hemisphere 73.9
2521 Female, age 94, right hemisphere 72.6
2848 Male, age 76, right hemisphere 71.7
Subiculum
nTPM: 74.5
2042 Male, age 76, both hemispheres 76.6
1901 Male, age 80, both hemispheres 76.4
1977 Female, age 85, both hemispheres 75.1
2619 Male, age 74, both hemispheres 74.7
2729 Female, age 91, right hemisphere 74.6
2438 Female, age 94, left hemisphere 69.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.0
Samples: 197

Max nTPM: 142.9
Min nTPM: 37.3
Std nTPM: 16.4
Median nTPM: 70.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 142.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 126.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 118.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 109.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 109.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 106.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 104.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 101.6
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 101.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 99.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 98.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.0
FF:10169-103B7 60 years, female 43.9
FF:10153-102I9 76 years, female 42.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.7
Samples: 4

Max nTPM: 33.4
Min nTPM: 19.0
Sample A Female 33.4
Sample B Female 21.1
Sample C Male 21.1
Sample D Male 19.0
Entorhinal cortex
nTPM: 17.7
Samples: 4

Max nTPM: 21.7
Min nTPM: 13.1
Sample A Female 21.7
Sample B Female 20.2
Sample C Male 15.9
Sample D Male 13.1
Subiculum
nTPM: 18.1
Samples: 4

Max nTPM: 25.6
Min nTPM: 14.0
Sample A Female 25.6
Sample B Female 17.2
Sample C Male 14.0
Sample D Male 15.5
Ventral hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 25.4
Min nTPM: 17.6
Sample A Female 25.4
Sample B Female 17.6
Sample C Male 21.9
Sample D Male 20.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 190.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 172.5
Samples: 4

Max nTPM: 183.9
Min nTPM: 161.8
Sample A Male 161.8
Sample B Male 178.9
Sample C Female 183.9
Sample D Female 165.2
Hippocampal formation
nTPM: 190.3
Samples: 4

Max nTPM: 211.4
Min nTPM: 176.0
Sample A Male 211.4
Sample B Male 176.0
Sample C Female 184.4
Sample D Female 189.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
392911 Antisense, RP_040804_01_F09, Mouse strain C57BL/6J (56 days, male) 1.3

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