HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.9 nTPM
HPA:33.9 nTPM
GTEx:31.3 nTPM
FANTOM5:163.3 Scaled Tags Per Million
Pig:89.0 nTPM
Mouse:105.8 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051836
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.9
Sample id Sample description nTPM
Hippocampus
nTPM: 30.3
1898 Male, age 80, left hemisphere 37.8
2529 Female, age 94, left hemisphere 31.0
1855 Male, age 76, left hemisphere 30.7
2621 Female, age 67, right hemisphere 28.4
1911 Female, age 85, right hemisphere 28.0
2148 Female, age 91, left hemisphere 25.9
Dentate gyrus
nTPM: 31.0
2530 Female, age 94, left hemisphere 36.6
2010 Male, age 76, both hemispheres 33.1
1927 Female, age 91, both hemispheres 32.5
2528 Male, age 74, both hemispheres 31.0
2246 Female, age 85, both hemispheres 28.8
2531 Female, age 67, both hemispheres 24.2
Entorhinal gyrus
nTPM: 31.6
2764 Male, age 80, right hemisphere 34.8
1938 Female, age 85, left hemisphere 33.8
2117 Female, age 91, right hemisphere 32.1
1787 Male, age 76, left hemisphere 30.8
2686 Male, age 75, right hemisphere 30.8
2613 Female, age 94, left hemisphere 27.4
Hippocampus, CA1
nTPM: 32.4
2749 Male, age 80, left hemisphere 41.2
2045 Male, age 76, both hemispheres 32.0
1873 Female, age 85, both hemispheres 31.8
2527 Male, age 74, both hemispheres 30.9
2082 Female, age 91, right hemisphere 26.0
Hippocampus, CA2
nTPM: 32.5
1892 Male, age 76, both hemispheres 37.4
1963 Male, age 80, left hemisphere 37.1
2249 Male, age 74, both hemispheres 32.4
2437 Female, age 94, left hemisphere 31.9
1940 Female, age 85, left hemisphere 28.1
2113 Female, age 91, right hemisphere 28.1
Hippocampus, CA3
nTPM: 30.4
2137 Male, age 80, left hemisphere 37.4
1867 Male, age 76, both hemispheres 33.4
1891 Female, age 85, both hemispheres 31.5
2436 Male, age 74, both hemispheres 29.2
2620 Female, age 94, left hemisphere 26.3
2861 Female, age 67, both hemispheres 24.3
Parahippocampal cortex
nTPM: 31.1
1850 Male, age 80, both hemispheres 38.8
2532 Female, age 72, left hemisphere 32.3
1990 Female, age 91, right hemisphere 32.2
2692 Male, age 74, both hemispheres 31.6
1933 Female, age 85, both hemispheres 31.4
2693 Female, age 94, both hemispheres 31.4
2245 Female, age 91, both hemispheres 31.0
2250 Female, age 67, right hemisphere 30.5
2018 Male, age 76, both hemispheres 28.8
2622 Female, age 67, right hemisphere 23.1
Perirhinal gyrus
nTPM: 33.9
1794 Male, age 80, right hemisphere 37.1
1841 Female, age 85, right hemisphere 33.6
2521 Female, age 94, right hemisphere 33.5
1847 Female, age 91, left hemisphere 33.2
2848 Male, age 76, right hemisphere 32.1
Subiculum
nTPM: 30.9
1901 Male, age 80, both hemispheres 35.5
1977 Female, age 85, both hemispheres 32.8
2042 Male, age 76, both hemispheres 29.9
2438 Female, age 94, left hemisphere 29.9
2619 Male, age 74, both hemispheres 29.4
2729 Female, age 91, right hemisphere 27.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.3
Samples: 197

Max nTPM: 50.0
Min nTPM: 18.4
Std nTPM: 5.1
Median nTPM: 30.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 50.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 47.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 45.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 44.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 44.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 43.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 43.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 43.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 41.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 41.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 40.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 163.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 163.3
FF:10169-103B7 60 years, female 197.7
FF:10153-102I9 76 years, female 128.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 89.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 89.0
Samples: 4

Max nTPM: 106.4
Min nTPM: 68.7
Sample A Female 106.4
Sample B Female 91.5
Sample C Male 89.4
Sample D Male 68.7
Entorhinal cortex
nTPM: 75.9
Samples: 4

Max nTPM: 88.4
Min nTPM: 67.6
Sample A Female 71.5
Sample B Female 88.4
Sample C Male 76.2
Sample D Male 67.6
Subiculum
nTPM: 77.7
Samples: 4

Max nTPM: 99.8
Min nTPM: 68.7
Sample A Female 99.8
Sample B Female 69.7
Sample C Male 72.6
Sample D Male 68.7
Ventral hippocampus
nTPM: 77.8
Samples: 4

Max nTPM: 84.5
Min nTPM: 65.0
Sample A Female 84.5
Sample B Female 65.0
Sample C Male 79.6
Sample D Male 82.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 103.2
Samples: 4

Max nTPM: 109.8
Min nTPM: 93.8
Sample A Male 93.8
Sample B Male 107.5
Sample C Female 101.7
Sample D Female 109.8
Hippocampal formation
nTPM: 105.8
Samples: 4

Max nTPM: 117.2
Min nTPM: 99.0
Sample A Male 117.2
Sample B Male 104.0
Sample C Female 99.0
Sample D Female 103.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
68076554 Antisense, RP_040923_02_G03, Mouse strain C57BL/6J (56 days, male) 8.5
70812942 Antisense, RP_050712_02_H02, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

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