HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:82.4 nTPM
HPA:82.4 nTPM
GTEx:93.2 nTPM
FANTOM5:51.2 Scaled Tags Per Million
Pig:23.2 nTPM
Mouse:37.5 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034507Antibody HPA034508
Glial cells MediumLow
Neuronal cells Not detectedMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.4
Sample id Sample description nTPM
Hippocampus
nTPM: 82.3
2621 Female, age 67, right hemisphere 86.0
1855 Male, age 76, left hemisphere 83.0
1911 Female, age 85, right hemisphere 83.0
1898 Male, age 80, left hemisphere 82.2
2529 Female, age 94, left hemisphere 80.7
2148 Female, age 91, left hemisphere 79.0
Dentate gyrus
nTPM: 80.6
2010 Male, age 76, both hemispheres 84.3
2246 Female, age 85, both hemispheres 84.1
2531 Female, age 67, both hemispheres 80.3
2530 Female, age 94, left hemisphere 79.7
1927 Female, age 91, both hemispheres 78.2
2528 Male, age 74, both hemispheres 76.9
Entorhinal gyrus
nTPM: 80.3
1938 Female, age 85, left hemisphere 84.5
2117 Female, age 91, right hemisphere 82.2
2686 Male, age 75, right hemisphere 82.1
1787 Male, age 76, left hemisphere 80.7
2764 Male, age 80, right hemisphere 76.3
2613 Female, age 94, left hemisphere 76.0
Hippocampus, CA1
nTPM: 80.7
2527 Male, age 74, both hemispheres 86.2
2045 Male, age 76, both hemispheres 83.6
1873 Female, age 85, both hemispheres 82.5
2749 Male, age 80, left hemisphere 76.2
2082 Female, age 91, right hemisphere 75.0
Hippocampus, CA2
nTPM: 79.2
2249 Male, age 74, both hemispheres 82.2
1940 Female, age 85, left hemisphere 82.1
2437 Female, age 94, left hemisphere 78.5
1892 Male, age 76, both hemispheres 78.3
2113 Female, age 91, right hemisphere 78.2
1963 Male, age 80, left hemisphere 76.2
Hippocampus, CA3
nTPM: 81.0
2861 Female, age 67, both hemispheres 86.3
1891 Female, age 85, both hemispheres 84.5
2436 Male, age 74, both hemispheres 83.6
1867 Male, age 76, both hemispheres 79.0
2620 Female, age 94, left hemisphere 77.1
2137 Male, age 80, left hemisphere 75.4
Parahippocampal cortex
nTPM: 82.4
2018 Male, age 76, both hemispheres 88.9
2692 Male, age 74, both hemispheres 87.8
1933 Female, age 85, both hemispheres 85.8
2250 Female, age 67, right hemisphere 82.9
1850 Male, age 80, both hemispheres 81.7
1990 Female, age 91, right hemisphere 81.3
2622 Female, age 67, right hemisphere 79.5
2245 Female, age 91, both hemispheres 79.2
2532 Female, age 72, left hemisphere 79.1
2693 Female, age 94, both hemispheres 77.6
Perirhinal gyrus
nTPM: 80.9
1841 Female, age 85, right hemisphere 83.1
1794 Male, age 80, right hemisphere 82.9
2848 Male, age 76, right hemisphere 81.4
1847 Female, age 91, left hemisphere 79.1
2521 Female, age 94, right hemisphere 77.9
Subiculum
nTPM: 80.3
2042 Male, age 76, both hemispheres 83.2
1977 Female, age 85, both hemispheres 82.0
2438 Female, age 94, left hemisphere 81.9
2619 Male, age 74, both hemispheres 81.4
1901 Male, age 80, both hemispheres 78.6
2729 Female, age 91, right hemisphere 74.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 93.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 93.2
Samples: 197

Max nTPM: 579.9
Min nTPM: 14.4
Std nTPM: 76.2
Median nTPM: 69.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 579.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 500.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 364.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 364.0
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 316.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 278.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 257.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 245.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 244.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 217.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 214.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.2
FF:10153-102I9 76 years, female 94.2
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 22.1
Min nTPM: 13.9
Sample A Female 21.2
Sample B Female 19.9
Sample C Male 22.1
Sample D Male 13.9
Entorhinal cortex
nTPM: 17.7
Samples: 4

Max nTPM: 21.3
Min nTPM: 10.8
Sample A Female 19.1
Sample B Female 19.6
Sample C Male 21.3
Sample D Male 10.8
Subiculum
nTPM: 20.6
Samples: 4

Max nTPM: 23.3
Min nTPM: 18.0
Sample A Female 22.0
Sample B Female 18.0
Sample C Male 23.3
Sample D Male 19.0
Ventral hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 33.1
Min nTPM: 17.6
Sample A Female 23.5
Sample B Female 18.7
Sample C Male 33.1
Sample D Male 17.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.4
Samples: 4

Max nTPM: 26.2
Min nTPM: 22.3
Sample A Male 26.2
Sample B Male 24.5
Sample C Female 22.3
Sample D Female 24.4
Hippocampal formation
nTPM: 37.5
Samples: 4

Max nTPM: 41.9
Min nTPM: 32.9
Sample A Male 32.9
Sample B Male 40.1
Sample C Female 35.1
Sample D Female 41.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
71496423 Antisense, RP_050913_04_E06, Mouse strain C57BL/6J (56 days, male) 4.1

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