HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.1 nTPM
HPA:11.1 nTPM
GTEx:48.8 nTPM
FANTOM5:99.0 Scaled Tags Per Million
Pig:30.0 nTPM
Mouse:86.2 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019547
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.1
Sample id Sample description nTPM
Hippocampus
nTPM: 10.4
1898 Male, age 80, left hemisphere 12.4
1911 Female, age 85, right hemisphere 11.3
2529 Female, age 94, left hemisphere 9.8
1855 Male, age 76, left hemisphere 9.6
2148 Female, age 91, left hemisphere 9.6
2621 Female, age 67, right hemisphere 9.5
Dentate gyrus
nTPM: 10.8
2530 Female, age 94, left hemisphere 12.6
1927 Female, age 91, both hemispheres 12.0
2246 Female, age 85, both hemispheres 11.6
2531 Female, age 67, both hemispheres 10.4
2528 Male, age 74, both hemispheres 10.1
2010 Male, age 76, both hemispheres 8.2
Entorhinal gyrus
nTPM: 9.9
1938 Female, age 85, left hemisphere 11.5
2613 Female, age 94, left hemisphere 10.3
2686 Male, age 75, right hemisphere 10.2
1787 Male, age 76, left hemisphere 9.3
2117 Female, age 91, right hemisphere 9.2
2764 Male, age 80, right hemisphere 9.0
Hippocampus, CA1
nTPM: 10.1
1873 Female, age 85, both hemispheres 14.3
2045 Male, age 76, both hemispheres 10.0
2749 Male, age 80, left hemisphere 9.2
2527 Male, age 74, both hemispheres 8.9
2082 Female, age 91, right hemisphere 8.2
Hippocampus, CA2
nTPM: 10.8
2249 Male, age 74, both hemispheres 13.0
1892 Male, age 76, both hemispheres 12.5
1963 Male, age 80, left hemisphere 10.5
2437 Female, age 94, left hemisphere 10.5
1940 Female, age 85, left hemisphere 9.2
2113 Female, age 91, right hemisphere 9.1
Hippocampus, CA3
nTPM: 9.8
1891 Female, age 85, both hemispheres 11.5
2137 Male, age 80, left hemisphere 9.9
2620 Female, age 94, left hemisphere 9.9
2436 Male, age 74, both hemispheres 9.8
1867 Male, age 76, both hemispheres 8.7
2861 Female, age 67, both hemispheres 8.6
Parahippocampal cortex
nTPM: 10.1
1850 Male, age 80, both hemispheres 13.0
2250 Female, age 67, right hemisphere 11.1
2532 Female, age 72, left hemisphere 10.5
1990 Female, age 91, right hemisphere 10.4
2245 Female, age 91, both hemispheres 10.0
1933 Female, age 85, both hemispheres 9.7
2018 Male, age 76, both hemispheres 9.6
2693 Female, age 94, both hemispheres 9.5
2692 Male, age 74, both hemispheres 9.3
2622 Female, age 67, right hemisphere 8.1
Perirhinal gyrus
nTPM: 11.1
1794 Male, age 80, right hemisphere 12.7
1841 Female, age 85, right hemisphere 10.9
1847 Female, age 91, left hemisphere 10.8
2521 Female, age 94, right hemisphere 10.6
2848 Male, age 76, right hemisphere 10.5
Subiculum
nTPM: 9.7
1901 Male, age 80, both hemispheres 10.9
2729 Female, age 91, right hemisphere 10.3
1977 Female, age 85, both hemispheres 10.0
2042 Male, age 76, both hemispheres 10.0
2619 Male, age 74, both hemispheres 9.0
2438 Female, age 94, left hemisphere 8.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.8
Samples: 197

Max nTPM: 102.4
Min nTPM: 18.7
Std nTPM: 13.3
Median nTPM: 46.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 102.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 90.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 89.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 88.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 81.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 79.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 79.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 77.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 75.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 74.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 74.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.0
FF:10153-102I9 76 years, female 104.9
FF:10169-103B7 60 years, female 93.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.0
Samples: 4

Max nTPM: 38.8
Min nTPM: 19.9
Sample A Female 38.8
Sample B Female 29.4
Sample C Male 32.0
Sample D Male 19.9
Entorhinal cortex
nTPM: 22.9
Samples: 4

Max nTPM: 27.7
Min nTPM: 18.3
Sample A Female 21.7
Sample B Female 27.7
Sample C Male 23.7
Sample D Male 18.3
Subiculum
nTPM: 23.8
Samples: 4

Max nTPM: 27.1
Min nTPM: 21.3
Sample A Female 27.1
Sample B Female 23.8
Sample C Male 21.3
Sample D Male 23.1
Ventral hippocampus
nTPM: 24.3
Samples: 4

Max nTPM: 27.4
Min nTPM: 21.1
Sample A Female 27.4
Sample B Female 21.1
Sample C Male 21.9
Sample D Male 26.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.3
Samples: 4

Max nTPM: 89.2
Min nTPM: 80.3
Sample A Male 87.3
Sample B Male 88.2
Sample C Female 80.3
Sample D Female 89.2
Hippocampal formation
nTPM: 71.9
Samples: 4

Max nTPM: 75.4
Min nTPM: 66.5
Sample A Male 73.9
Sample B Male 66.5
Sample C Female 75.4
Sample D Female 71.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
68151447 Antisense, RP_041116_01_C06, Mouse strain C57BL/6J (56 days, male) 3.5

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