HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:126.8 nTPM
HPA:126.8 nTPM
GTEx:73.7 nTPM
FANTOM5:105.4 Scaled Tags Per Million
Pig:59.8 nTPM
Mouse:75.9 nTPM
Allen mouse:7.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023015Antibody HPA052395
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 126.8
Sample id Sample description nTPM
Hippocampus
nTPM: 122.8
1898 Male, age 80, left hemisphere 130.3
2529 Female, age 94, left hemisphere 123.4
2621 Female, age 67, right hemisphere 123.0
1855 Male, age 76, left hemisphere 122.3
2148 Female, age 91, left hemisphere 119.6
1911 Female, age 85, right hemisphere 118.2
Dentate gyrus
nTPM: 120.6
1927 Female, age 91, both hemispheres 123.2
2010 Male, age 76, both hemispheres 122.0
2528 Male, age 74, both hemispheres 121.2
2246 Female, age 85, both hemispheres 121.1
2530 Female, age 94, left hemisphere 117.9
2531 Female, age 67, both hemispheres 117.9
Entorhinal gyrus
nTPM: 120.8
1938 Female, age 85, left hemisphere 124.5
2764 Male, age 80, right hemisphere 122.2
1787 Male, age 76, left hemisphere 120.9
2117 Female, age 91, right hemisphere 119.7
2686 Male, age 75, right hemisphere 119.6
2613 Female, age 94, left hemisphere 118.2
Hippocampus, CA1
nTPM: 124.0
2749 Male, age 80, left hemisphere 134.7
1873 Female, age 85, both hemispheres 124.3
2527 Male, age 74, both hemispheres 122.9
2045 Male, age 76, both hemispheres 121.1
2082 Female, age 91, right hemisphere 117.0
Hippocampus, CA2
nTPM: 122.7
1892 Male, age 76, both hemispheres 129.4
1963 Male, age 80, left hemisphere 129.2
1940 Female, age 85, left hemisphere 121.6
2249 Male, age 74, both hemispheres 120.4
2437 Female, age 94, left hemisphere 119.1
2113 Female, age 91, right hemisphere 116.7
Hippocampus, CA3
nTPM: 123.9
2137 Male, age 80, left hemisphere 132.9
1867 Male, age 76, both hemispheres 126.1
2620 Female, age 94, left hemisphere 124.1
2436 Male, age 74, both hemispheres 122.8
1891 Female, age 85, both hemispheres 121.1
2861 Female, age 67, both hemispheres 116.3
Parahippocampal cortex
nTPM: 121.6
1850 Male, age 80, both hemispheres 129.3
2245 Female, age 91, both hemispheres 123.4
1933 Female, age 85, both hemispheres 122.9
1990 Female, age 91, right hemisphere 122.9
2532 Female, age 72, left hemisphere 122.1
2250 Female, age 67, right hemisphere 120.6
2018 Male, age 76, both hemispheres 120.0
2693 Female, age 94, both hemispheres 119.6
2622 Female, age 67, right hemisphere 118.5
2692 Male, age 74, both hemispheres 116.9
Perirhinal gyrus
nTPM: 126.8
1794 Male, age 80, right hemisphere 131.7
1847 Female, age 91, left hemisphere 130.4
1841 Female, age 85, right hemisphere 125.9
2848 Male, age 76, right hemisphere 123.7
2521 Female, age 94, right hemisphere 122.5
Subiculum
nTPM: 120.7
1901 Male, age 80, both hemispheres 125.0
1977 Female, age 85, both hemispheres 122.6
2438 Female, age 94, left hemisphere 121.6
2619 Male, age 74, both hemispheres 119.4
2042 Male, age 76, both hemispheres 119.2
2729 Female, age 91, right hemisphere 116.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.7
Samples: 197

Max nTPM: 183.1
Min nTPM: 36.1
Std nTPM: 26.2
Median nTPM: 70.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 183.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 173.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 145.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 139.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 136.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 136.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 136.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 134.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 132.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 129.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 129.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 105.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 105.4
FF:10169-103B7 60 years, female 111.9
FF:10153-102I9 76 years, female 99.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 59.8
Samples: 4

Max nTPM: 89.0
Min nTPM: 37.8
Sample A Female 89.0
Sample B Female 49.3
Sample C Male 63.1
Sample D Male 37.8
Entorhinal cortex
nTPM: 44.6
Samples: 4

Max nTPM: 52.1
Min nTPM: 40.7
Sample A Female 44.4
Sample B Female 52.1
Sample C Male 41.2
Sample D Male 40.7
Subiculum
nTPM: 46.6
Samples: 4

Max nTPM: 60.8
Min nTPM: 40.3
Sample A Female 60.8
Sample B Female 44.0
Sample C Male 40.3
Sample D Male 41.1
Ventral hippocampus
nTPM: 48.8
Samples: 4

Max nTPM: 56.2
Min nTPM: 37.0
Sample A Female 54.5
Sample B Female 37.0
Sample C Male 47.3
Sample D Male 56.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 75.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.8
Samples: 4

Max nTPM: 79.6
Min nTPM: 71.3
Sample A Male 71.3
Sample B Male 76.0
Sample C Female 72.1
Sample D Female 79.6
Hippocampal formation
nTPM: 75.9
Samples: 4

Max nTPM: 81.3
Min nTPM: 67.8
Sample A Male 78.6
Sample B Male 75.9
Sample C Female 81.3
Sample D Female 67.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.4
68795402 Antisense, RP_041116_02_H04, Mouse strain C57BL/6J (56 days, male) 7.4

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