HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.9 nTPM
HPA:28.9 nTPM
GTEx:84.1 nTPM
FANTOM5:297.8 Scaled Tags Per Million
Pig:217.7 nTPM
Mouse:293.9 nTPM
Allen mouse:13.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035210Antibody HPA062272
Glial cells LowNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.9
Sample id Sample description nTPM
Hippocampus
nTPM: 9.6
1898 Male, age 80, left hemisphere 28.3
2621 Female, age 67, right hemisphere 10.7
1855 Male, age 76, left hemisphere 9.3
2529 Female, age 94, left hemisphere 8.1
1911 Female, age 85, right hemisphere 1.4
2148 Female, age 91, left hemisphere 0.0
Dentate gyrus
nTPM: 20.3
2530 Female, age 94, left hemisphere 84.5
1927 Female, age 91, both hemispheres 16.5
2010 Male, age 76, both hemispheres 14.5
2246 Female, age 85, both hemispheres 3.2
2531 Female, age 67, both hemispheres 2.9
2528 Male, age 74, both hemispheres 0.0
Entorhinal gyrus
nTPM: 19.1
2686 Male, age 75, right hemisphere 32.2
1938 Female, age 85, left hemisphere 31.1
1787 Male, age 76, left hemisphere 20.3
2764 Male, age 80, right hemisphere 16.0
2613 Female, age 94, left hemisphere 15.1
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 13.2
2749 Male, age 80, left hemisphere 47.0
1873 Female, age 85, both hemispheres 13.0
2045 Male, age 76, both hemispheres 6.1
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
Hippocampus, CA2
nTPM: 15.3
1892 Male, age 76, both hemispheres 56.2
1963 Male, age 80, left hemisphere 19.1
2437 Female, age 94, left hemisphere 16.7
1940 Female, age 85, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 16.8
1867 Male, age 76, both hemispheres 43.6
2861 Female, age 67, both hemispheres 31.4
2137 Male, age 80, left hemisphere 18.2
1891 Female, age 85, both hemispheres 7.9
2436 Male, age 74, both hemispheres 0.0
2620 Female, age 94, left hemisphere 0.0
Parahippocampal cortex
nTPM: 18.8
2532 Female, age 72, left hemisphere 42.7
1850 Male, age 80, both hemispheres 34.0
2245 Female, age 91, both hemispheres 28.1
2018 Male, age 76, both hemispheres 22.1
1933 Female, age 85, both hemispheres 19.8
2693 Female, age 94, both hemispheres 11.8
2622 Female, age 67, right hemisphere 10.4
2250 Female, age 67, right hemisphere 7.1
1990 Female, age 91, right hemisphere 6.4
2692 Male, age 74, both hemispheres 5.8
Perirhinal gyrus
nTPM: 28.9
1841 Female, age 85, right hemisphere 41.7
2848 Male, age 76, right hemisphere 37.4
1794 Male, age 80, right hemisphere 37.1
1847 Female, age 91, left hemisphere 22.8
2521 Female, age 94, right hemisphere 5.7
Subiculum
nTPM: 10.2
1901 Male, age 80, both hemispheres 21.3
2438 Female, age 94, left hemisphere 16.5
1977 Female, age 85, both hemispheres 15.8
2042 Male, age 76, both hemispheres 7.7
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 84.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 84.1
Samples: 197

Max nTPM: 280.9
Min nTPM: 6.9
Std nTPM: 48.6
Median nTPM: 73.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 280.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 279.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 255.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 239.0
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 204.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 196.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 193.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 186.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 184.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 180.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 178.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 297.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 297.8
FF:10169-103B7 60 years, female 315.9
FF:10153-102I9 76 years, female 279.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 217.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 171.9
Samples: 4

Max nTPM: 201.8
Min nTPM: 144.3
Sample A Female 201.8
Sample B Female 167.0
Sample C Male 174.6
Sample D Male 144.3
Entorhinal cortex
nTPM: 217.7
Samples: 4

Max nTPM: 232.8
Min nTPM: 210.2
Sample A Female 210.2
Sample B Female 232.8
Sample C Male 212.9
Sample D Male 214.8
Subiculum
nTPM: 196.4
Samples: 4

Max nTPM: 265.4
Min nTPM: 160.2
Sample A Female 265.4
Sample B Female 182.6
Sample C Male 177.4
Sample D Male 160.2
Ventral hippocampus
nTPM: 154.1
Samples: 4

Max nTPM: 168.9
Min nTPM: 133.1
Sample A Female 152.9
Sample B Female 133.1
Sample C Male 161.4
Sample D Male 168.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 293.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 293.9
Samples: 4

Max nTPM: 310.7
Min nTPM: 269.8
Sample A Male 310.7
Sample B Male 304.5
Sample C Female 269.8
Sample D Female 290.4
Hippocampal formation
nTPM: 264.5
Samples: 4

Max nTPM: 295.8
Min nTPM: 237.5
Sample A Male 257.2
Sample B Male 267.3
Sample C Female 295.8
Sample D Female 237.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.6
74511818 Antisense, RP_060220_03_B06, Mouse strain C57BL/6J (56 days, male) 15.2
69735801 Antisense, RP_050503_03_E12, Mouse strain C57BL/6J (56 days, male) 11.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.