HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.5 nTPM
HPA:17.5 nTPM
GTEx:13.5 nTPM
FANTOM5:43.6 Scaled Tags Per Million
Pig:18.7 nTPM
Mouse:18.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030813Antibody CAB032306
Glial cells HighMedium
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.5
Sample id Sample description nTPM
Hippocampus
nTPM: 17.5
2529 Female, age 94, left hemisphere 20.7
1911 Female, age 85, right hemisphere 18.3
2621 Female, age 67, right hemisphere 18.1
1898 Male, age 80, left hemisphere 16.3
2148 Female, age 91, left hemisphere 16.3
1855 Male, age 76, left hemisphere 15.3
Dentate gyrus
nTPM: 16.1
2528 Male, age 74, both hemispheres 17.2
2246 Female, age 85, both hemispheres 17.1
2530 Female, age 94, left hemisphere 16.8
2531 Female, age 67, both hemispheres 16.5
1927 Female, age 91, both hemispheres 14.9
2010 Male, age 76, both hemispheres 14.0
Entorhinal gyrus
nTPM: 15.1
2117 Female, age 91, right hemisphere 17.6
2686 Male, age 75, right hemisphere 16.3
1787 Male, age 76, left hemisphere 15.9
2613 Female, age 94, left hemisphere 14.4
2764 Male, age 80, right hemisphere 13.3
1938 Female, age 85, left hemisphere 12.9
Hippocampus, CA1
nTPM: 15.8
2527 Male, age 74, both hemispheres 18.4
1873 Female, age 85, both hemispheres 17.1
2082 Female, age 91, right hemisphere 16.5
2045 Male, age 76, both hemispheres 14.2
2749 Male, age 80, left hemisphere 12.6
Hippocampus, CA2
nTPM: 16.7
2113 Female, age 91, right hemisphere 19.0
2249 Male, age 74, both hemispheres 17.6
1963 Male, age 80, left hemisphere 17.5
1940 Female, age 85, left hemisphere 16.9
2437 Female, age 94, left hemisphere 16.9
1892 Male, age 76, both hemispheres 12.5
Hippocampus, CA3
nTPM: 15.8
1891 Female, age 85, both hemispheres 19.3
2436 Male, age 74, both hemispheres 17.6
2620 Female, age 94, left hemisphere 16.7
2861 Female, age 67, both hemispheres 15.6
2137 Male, age 80, left hemisphere 13.8
1867 Male, age 76, both hemispheres 11.5
Parahippocampal cortex
nTPM: 15.4
2692 Male, age 74, both hemispheres 20.7
2622 Female, age 67, right hemisphere 17.3
2532 Female, age 72, left hemisphere 16.9
1990 Female, age 91, right hemisphere 16.7
2693 Female, age 94, both hemispheres 14.9
2245 Female, age 91, both hemispheres 14.7
1850 Male, age 80, both hemispheres 14.1
2250 Female, age 67, right hemisphere 13.6
1933 Female, age 85, both hemispheres 13.2
2018 Male, age 76, both hemispheres 12.0
Perirhinal gyrus
nTPM: 13.8
2521 Female, age 94, right hemisphere 14.8
1841 Female, age 85, right hemisphere 14.0
1794 Male, age 80, right hemisphere 13.7
1847 Female, age 91, left hemisphere 13.7
2848 Male, age 76, right hemisphere 13.0
Subiculum
nTPM: 16.9
2042 Male, age 76, both hemispheres 18.8
2619 Male, age 74, both hemispheres 18.5
2729 Female, age 91, right hemisphere 18.0
2438 Female, age 94, left hemisphere 16.3
1901 Male, age 80, both hemispheres 15.9
1977 Female, age 85, both hemispheres 13.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.5
Samples: 197

Max nTPM: 34.9
Min nTPM: 6.9
Std nTPM: 3.3
Median nTPM: 13.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 34.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 24.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 21.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 20.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 19.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 19.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 19.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 19.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 19.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 19.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 19.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.6
FF:10153-102I9 76 years, female 58.9
FF:10169-103B7 60 years, female 28.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 19.7
Min nTPM: 17.9
Sample A Female 19.0
Sample B Female 17.9
Sample C Male 19.7
Sample D Male 18.3
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 18.2
Min nTPM: 15.5
Sample A Female 17.3
Sample B Female 18.2
Sample C Male 15.5
Sample D Male 17.6
Subiculum
nTPM: 17.2
Samples: 4

Max nTPM: 18.3
Min nTPM: 16.3
Sample A Female 16.4
Sample B Female 17.9
Sample C Male 16.3
Sample D Male 18.3
Ventral hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 20.2
Min nTPM: 17.1
Sample A Female 18.0
Sample B Female 17.1
Sample C Male 17.5
Sample D Male 20.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 18.4
Min nTPM: 16.3
Sample A Male 16.4
Sample B Male 18.4
Sample C Female 17.0
Sample D Female 16.3
Hippocampal formation
nTPM: 18.3
Samples: 4

Max nTPM: 20.1
Min nTPM: 15.4
Sample A Male 17.7
Sample B Male 20.1
Sample C Female 20.0
Sample D Female 15.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68203461 Antisense, RP_041208_01_A08, Mouse strain C57BL/6J (56 days, male) 0.5

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