HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:120.2 nTPM
HPA:120.2 nTPM
GTEx:78.5 nTPM
FANTOM5:122.7 Scaled Tags Per Million
Pig:86.6 nTPM
Mouse:140.7 nTPM
Allen mouse:21.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039291Antibody HPA044062Antibody CAB017448
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 120.2
Sample id Sample description nTPM
Hippocampus
nTPM: 115.3
2529 Female, age 94, left hemisphere 125.0
1898 Male, age 80, left hemisphere 117.8
2621 Female, age 67, right hemisphere 117.4
1855 Male, age 76, left hemisphere 113.6
2148 Female, age 91, left hemisphere 110.3
1911 Female, age 85, right hemisphere 107.5
Dentate gyrus
nTPM: 116.4
2010 Male, age 76, both hemispheres 124.3
2530 Female, age 94, left hemisphere 119.7
2528 Male, age 74, both hemispheres 115.6
1927 Female, age 91, both hemispheres 115.1
2246 Female, age 85, both hemispheres 113.0
2531 Female, age 67, both hemispheres 110.6
Entorhinal gyrus
nTPM: 110.9
1787 Male, age 76, left hemisphere 116.0
1938 Female, age 85, left hemisphere 114.2
2764 Male, age 80, right hemisphere 114.2
2117 Female, age 91, right hemisphere 110.6
2686 Male, age 75, right hemisphere 106.6
2613 Female, age 94, left hemisphere 103.6
Hippocampus, CA1
nTPM: 120.2
2045 Male, age 76, both hemispheres 131.8
2749 Male, age 80, left hemisphere 126.4
1873 Female, age 85, both hemispheres 119.5
2527 Male, age 74, both hemispheres 113.8
2082 Female, age 91, right hemisphere 109.3
Hippocampus, CA2
nTPM: 115.0
1892 Male, age 76, both hemispheres 127.5
2249 Male, age 74, both hemispheres 116.7
1963 Male, age 80, left hemisphere 116.3
2437 Female, age 94, left hemisphere 114.5
2113 Female, age 91, right hemisphere 109.2
1940 Female, age 85, left hemisphere 106.0
Hippocampus, CA3
nTPM: 115.4
1867 Male, age 76, both hemispheres 124.8
2620 Female, age 94, left hemisphere 119.0
2436 Male, age 74, both hemispheres 116.6
2137 Male, age 80, left hemisphere 114.1
1891 Female, age 85, both hemispheres 111.6
2861 Female, age 67, both hemispheres 106.2
Parahippocampal cortex
nTPM: 113.7
2018 Male, age 76, both hemispheres 120.7
2250 Female, age 67, right hemisphere 120.6
1933 Female, age 85, both hemispheres 117.0
2245 Female, age 91, both hemispheres 116.1
1850 Male, age 80, both hemispheres 114.8
2532 Female, age 72, left hemisphere 114.1
1990 Female, age 91, right hemisphere 113.7
2692 Male, age 74, both hemispheres 111.3
2622 Female, age 67, right hemisphere 105.0
2693 Female, age 94, both hemispheres 104.1
Perirhinal gyrus
nTPM: 113.9
1847 Female, age 91, left hemisphere 119.2
2848 Male, age 76, right hemisphere 116.6
1841 Female, age 85, right hemisphere 115.0
1794 Male, age 80, right hemisphere 110.5
2521 Female, age 94, right hemisphere 108.2
Subiculum
nTPM: 115.8
2438 Female, age 94, left hemisphere 121.0
2042 Male, age 76, both hemispheres 120.8
1901 Male, age 80, both hemispheres 117.0
1977 Female, age 85, both hemispheres 116.1
2619 Male, age 74, both hemispheres 113.4
2729 Female, age 91, right hemisphere 106.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 78.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 78.5
Samples: 197

Max nTPM: 553.8
Min nTPM: 34.1
Std nTPM: 52.0
Median nTPM: 68.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 553.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 392.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 296.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 227.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 224.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 224.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 197.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 153.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 145.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 119.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 117.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 122.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 122.7
FF:10153-102I9 76 years, female 146.0
FF:10169-103B7 60 years, female 99.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 86.7
Samples: 4

Max nTPM: 116.0
Min nTPM: 71.2
Sample A Female 116.0
Sample B Female 80.2
Sample C Male 79.2
Sample D Male 71.2
Entorhinal cortex
nTPM: 76.9
Samples: 4

Max nTPM: 91.1
Min nTPM: 62.5
Sample A Female 91.1
Sample B Female 85.0
Sample C Male 69.0
Sample D Male 62.5
Subiculum
nTPM: 74.0
Samples: 4

Max nTPM: 101.6
Min nTPM: 59.9
Sample A Female 101.6
Sample B Female 64.4
Sample C Male 59.9
Sample D Male 70.1
Ventral hippocampus
nTPM: 77.1
Samples: 4

Max nTPM: 87.8
Min nTPM: 52.7
Sample A Female 87.8
Sample B Female 52.7
Sample C Male 85.9
Sample D Male 82.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 140.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 138.4
Samples: 4

Max nTPM: 147.0
Min nTPM: 124.5
Sample A Male 124.5
Sample B Male 143.2
Sample C Female 147.0
Sample D Female 139.0
Hippocampal formation
nTPM: 140.7
Samples: 4

Max nTPM: 147.4
Min nTPM: 130.4
Sample A Male 147.4
Sample B Male 130.4
Sample C Female 142.1
Sample D Female 142.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.9
413807 Antisense, RP_040809_01_F06, Mouse strain C57BL/6J (56 days, male) 21.9

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