HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:82.7 nTPM
HPA:82.7 nTPM
GTEx:89.3 nTPM
FANTOM5:92.6 Scaled Tags Per Million
Pig:53.7 nTPM
Mouse:127.8 nTPM
Allen mouse:12.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042703
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.7
Sample id Sample description nTPM
Hippocampus
nTPM: 78.0
2148 Female, age 91, left hemisphere 81.7
1911 Female, age 85, right hemisphere 79.2
2621 Female, age 67, right hemisphere 79.1
2529 Female, age 94, left hemisphere 78.4
1855 Male, age 76, left hemisphere 75.8
1898 Male, age 80, left hemisphere 73.8
Dentate gyrus
nTPM: 81.4
2531 Female, age 67, both hemispheres 92.2
2246 Female, age 85, both hemispheres 83.6
1927 Female, age 91, both hemispheres 80.1
2530 Female, age 94, left hemisphere 79.4
2528 Male, age 74, both hemispheres 77.6
2010 Male, age 76, both hemispheres 75.2
Entorhinal gyrus
nTPM: 74.9
1787 Male, age 76, left hemisphere 76.8
1938 Female, age 85, left hemisphere 76.2
2686 Male, age 75, right hemisphere 75.6
2764 Male, age 80, right hemisphere 75.3
2613 Female, age 94, left hemisphere 73.9
2117 Female, age 91, right hemisphere 71.4
Hippocampus, CA1
nTPM: 80.0
2045 Male, age 76, both hemispheres 86.0
2749 Male, age 80, left hemisphere 81.1
1873 Female, age 85, both hemispheres 81.0
2082 Female, age 91, right hemisphere 76.9
2527 Male, age 74, both hemispheres 74.9
Hippocampus, CA2
nTPM: 76.5
1940 Female, age 85, left hemisphere 85.0
2437 Female, age 94, left hemisphere 77.6
2113 Female, age 91, right hemisphere 75.4
2249 Male, age 74, both hemispheres 74.5
1892 Male, age 76, both hemispheres 73.6
1963 Male, age 80, left hemisphere 72.7
Hippocampus, CA3
nTPM: 82.7
2620 Female, age 94, left hemisphere 89.7
2861 Female, age 67, both hemispheres 88.6
2137 Male, age 80, left hemisphere 84.1
1867 Male, age 76, both hemispheres 79.3
1891 Female, age 85, both hemispheres 78.0
2436 Male, age 74, both hemispheres 76.5
Parahippocampal cortex
nTPM: 77.1
2532 Female, age 72, left hemisphere 80.9
1933 Female, age 85, both hemispheres 80.3
2622 Female, age 67, right hemisphere 79.5
2245 Female, age 91, both hemispheres 78.3
2250 Female, age 67, right hemisphere 76.5
2018 Male, age 76, both hemispheres 76.2
1850 Male, age 80, both hemispheres 75.9
2693 Female, age 94, both hemispheres 75.6
1990 Female, age 91, right hemisphere 74.1
2692 Male, age 74, both hemispheres 73.4
Perirhinal gyrus
nTPM: 80.3
1841 Female, age 85, right hemisphere 87.1
1794 Male, age 80, right hemisphere 82.6
1847 Female, age 91, left hemisphere 79.3
2521 Female, age 94, right hemisphere 77.1
2848 Male, age 76, right hemisphere 75.2
Subiculum
nTPM: 75.4
1977 Female, age 85, both hemispheres 78.5
2729 Female, age 91, right hemisphere 76.8
2619 Male, age 74, both hemispheres 75.6
2438 Female, age 94, left hemisphere 74.1
2042 Male, age 76, both hemispheres 73.8
1901 Male, age 80, both hemispheres 73.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 89.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 89.3
Samples: 197

Max nTPM: 217.2
Min nTPM: 28.7
Std nTPM: 31.2
Median nTPM: 85.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 217.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 198.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 182.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 182.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 163.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 162.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 160.9
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 157.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 150.0
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 140.0
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 139.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 92.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 92.6
FF:10169-103B7 60 years, female 103.5
FF:10153-102I9 76 years, female 81.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 50.3
Samples: 4

Max nTPM: 54.6
Min nTPM: 46.1
Sample A Female 54.6
Sample B Female 46.1
Sample C Male 49.9
Sample D Male 50.7
Entorhinal cortex
nTPM: 53.7
Samples: 4

Max nTPM: 69.7
Min nTPM: 43.2
Sample A Female 53.9
Sample B Female 48.1
Sample C Male 69.7
Sample D Male 43.2
Subiculum
nTPM: 46.1
Samples: 4

Max nTPM: 65.9
Min nTPM: 33.8
Sample A Female 65.9
Sample B Female 42.3
Sample C Male 33.8
Sample D Male 42.4
Ventral hippocampus
nTPM: 36.6
Samples: 4

Max nTPM: 48.7
Min nTPM: 25.5
Sample A Female 25.5
Sample B Female 34.3
Sample C Male 37.8
Sample D Male 48.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 127.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 127.9
Samples: 4

Max nTPM: 141.0
Min nTPM: 112.0
Sample A Male 121.3
Sample B Male 137.1
Sample C Female 112.0
Sample D Female 141.0
Hippocampal formation
nTPM: 91.2
Samples: 4

Max nTPM: 98.5
Min nTPM: 82.2
Sample A Male 98.5
Sample B Male 86.0
Sample C Female 82.2
Sample D Female 98.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.0
2483 Antisense, RP_040604_02_A06, Mouse strain C57BL/6J (56 days, male) 12.0
2484 Antisense, RP_040604_02_A06, Mouse strain C57BL/6J (56 days, male) 11.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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