HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:88.9 nTPM
HPA:88.9 nTPM
GTEx:108.7 nTPM
FANTOM5:46.3 Scaled Tags Per Million
Mouse:81.4 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046112Antibody HPA062121
Glial cells Not detectedMedium
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 88.9
Sample id Sample description nTPM
Hippocampus
nTPM: 87.3
1898 Male, age 80, left hemisphere 89.4
1855 Male, age 76, left hemisphere 89.2
2529 Female, age 94, left hemisphere 88.7
1911 Female, age 85, right hemisphere 86.9
2148 Female, age 91, left hemisphere 85.0
2621 Female, age 67, right hemisphere 84.5
Dentate gyrus
nTPM: 86.8
2010 Male, age 76, both hemispheres 92.6
2528 Male, age 74, both hemispheres 88.5
2246 Female, age 85, both hemispheres 86.6
1927 Female, age 91, both hemispheres 84.8
2530 Female, age 94, left hemisphere 84.6
2531 Female, age 67, both hemispheres 83.4
Entorhinal gyrus
nTPM: 85.4
2764 Male, age 80, right hemisphere 89.0
1787 Male, age 76, left hemisphere 87.4
1938 Female, age 85, left hemisphere 86.5
2117 Female, age 91, right hemisphere 85.3
2613 Female, age 94, left hemisphere 82.2
2686 Male, age 75, right hemisphere 81.7
Hippocampus, CA1
nTPM: 88.6
2045 Male, age 76, both hemispheres 92.4
2749 Male, age 80, left hemisphere 89.8
2527 Male, age 74, both hemispheres 87.9
1873 Female, age 85, both hemispheres 86.9
2082 Female, age 91, right hemisphere 86.2
Hippocampus, CA2
nTPM: 87.2
1963 Male, age 80, left hemisphere 91.2
2249 Male, age 74, both hemispheres 89.9
1892 Male, age 76, both hemispheres 88.9
1940 Female, age 85, left hemisphere 85.3
2437 Female, age 94, left hemisphere 84.8
2113 Female, age 91, right hemisphere 83.4
Hippocampus, CA3
nTPM: 85.9
1867 Male, age 76, both hemispheres 89.0
2436 Male, age 74, both hemispheres 87.8
2137 Male, age 80, left hemisphere 86.8
1891 Female, age 85, both hemispheres 85.6
2620 Female, age 94, left hemisphere 84.6
2861 Female, age 67, both hemispheres 81.7
Parahippocampal cortex
nTPM: 86.1
2018 Male, age 76, both hemispheres 91.0
1850 Male, age 80, both hemispheres 89.8
1933 Female, age 85, both hemispheres 87.0
2250 Female, age 67, right hemisphere 86.7
2245 Female, age 91, both hemispheres 86.6
2532 Female, age 72, left hemisphere 86.2
1990 Female, age 91, right hemisphere 83.9
2692 Male, age 74, both hemispheres 83.9
2693 Female, age 94, both hemispheres 83.4
2622 Female, age 67, right hemisphere 82.6
Perirhinal gyrus
nTPM: 88.9
1847 Female, age 91, left hemisphere 94.4
1794 Male, age 80, right hemisphere 89.8
1841 Female, age 85, right hemisphere 89.5
2521 Female, age 94, right hemisphere 85.7
2848 Male, age 76, right hemisphere 85.3
Subiculum
nTPM: 86.7
2042 Male, age 76, both hemispheres 89.0
1977 Female, age 85, both hemispheres 88.1
2619 Male, age 74, both hemispheres 88.0
1901 Male, age 80, both hemispheres 87.3
2729 Female, age 91, right hemisphere 85.5
2438 Female, age 94, left hemisphere 82.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 108.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 108.7
Samples: 197

Max nTPM: 250.0
Min nTPM: 55.0
Std nTPM: 23.4
Median nTPM: 103.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 250.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 177.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 167.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 166.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 164.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 161.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 159.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 158.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 157.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 156.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 152.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.3
FF:10169-103B7 60 years, female 48.1
FF:10153-102I9 76 years, female 44.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 81.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.1
Samples: 4

Max nTPM: 80.4
Min nTPM: 75.9
Sample A Male 75.9
Sample B Male 78.6
Sample C Female 80.4
Sample D Female 77.4
Hippocampal formation
nTPM: 81.4
Samples: 4

Max nTPM: 86.5
Min nTPM: 77.0
Sample A Male 86.5
Sample B Male 77.0
Sample C Female 79.5
Sample D Female 82.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
70474941 Antisense, RP_050623_01_D11, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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