HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.3 nTPM
HPA:17.3 nTPM
GTEx:13.2 nTPM
FANTOM5:36.9 Scaled Tags Per Million
Pig:49.1 nTPM
Mouse:49.0 nTPM
Allen mouse:5.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041920Antibody HPA042192
Glial cells LowNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.3
Sample id Sample description nTPM
Hippocampus
nTPM: 10.3
1898 Male, age 80, left hemisphere 16.5
2621 Female, age 67, right hemisphere 12.1
1855 Male, age 76, left hemisphere 9.8
1911 Female, age 85, right hemisphere 9.5
2529 Female, age 94, left hemisphere 7.4
2148 Female, age 91, left hemisphere 6.5
Dentate gyrus
nTPM: 10.9
2010 Male, age 76, both hemispheres 18.2
1927 Female, age 91, both hemispheres 13.4
2530 Female, age 94, left hemisphere 10.6
2246 Female, age 85, both hemispheres 9.0
2528 Male, age 74, both hemispheres 7.6
2531 Female, age 67, both hemispheres 6.8
Entorhinal gyrus
nTPM: 12.5
2764 Male, age 80, right hemisphere 16.7
1938 Female, age 85, left hemisphere 15.1
1787 Male, age 76, left hemisphere 12.8
2686 Male, age 75, right hemisphere 11.8
2613 Female, age 94, left hemisphere 10.7
2117 Female, age 91, right hemisphere 8.2
Hippocampus, CA1
nTPM: 12.7
2749 Male, age 80, left hemisphere 19.6
1873 Female, age 85, both hemispheres 14.1
2045 Male, age 76, both hemispheres 13.5
2527 Male, age 74, both hemispheres 10.0
2082 Female, age 91, right hemisphere 6.4
Hippocampus, CA2
nTPM: 13.0
1892 Male, age 76, both hemispheres 22.2
1963 Male, age 80, left hemisphere 17.3
1940 Female, age 85, left hemisphere 12.8
2437 Female, age 94, left hemisphere 9.4
2249 Male, age 74, both hemispheres 9.0
2113 Female, age 91, right hemisphere 7.4
Hippocampus, CA3
nTPM: 12.2
1867 Male, age 76, both hemispheres 18.2
2137 Male, age 80, left hemisphere 16.0
1891 Female, age 85, both hemispheres 11.7
2436 Male, age 74, both hemispheres 11.1
2620 Female, age 94, left hemisphere 10.3
2861 Female, age 67, both hemispheres 5.9
Parahippocampal cortex
nTPM: 12.6
1850 Male, age 80, both hemispheres 20.8
2693 Female, age 94, both hemispheres 14.9
1933 Female, age 85, both hemispheres 14.7
2018 Male, age 76, both hemispheres 13.9
1990 Female, age 91, right hemisphere 13.6
2532 Female, age 72, left hemisphere 12.0
2250 Female, age 67, right hemisphere 10.2
2692 Male, age 74, both hemispheres 8.8
2245 Female, age 91, both hemispheres 8.7
2622 Female, age 67, right hemisphere 7.7
Perirhinal gyrus
nTPM: 17.3
1841 Female, age 85, right hemisphere 20.3
1794 Male, age 80, right hemisphere 19.3
1847 Female, age 91, left hemisphere 17.1
2848 Male, age 76, right hemisphere 15.2
2521 Female, age 94, right hemisphere 14.6
Subiculum
nTPM: 10.0
1977 Female, age 85, both hemispheres 14.1
1901 Male, age 80, both hemispheres 12.8
2042 Male, age 76, both hemispheres 10.8
2619 Male, age 74, both hemispheres 9.2
2438 Female, age 94, left hemisphere 7.1
2729 Female, age 91, right hemisphere 6.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.2
Samples: 197

Max nTPM: 23.7
Min nTPM: 8.3
Std nTPM: 2.8
Median nTPM: 12.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 23.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 23.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 22.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 21.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 20.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 19.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 19.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 19.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 18.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 18.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 18.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.9
FF:10153-102I9 76 years, female 39.3
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.1
Samples: 4

Max nTPM: 55.9
Min nTPM: 38.4
Sample A Female 55.9
Sample B Female 49.8
Sample C Male 52.4
Sample D Male 38.4
Entorhinal cortex
nTPM: 46.3
Samples: 4

Max nTPM: 49.2
Min nTPM: 42.8
Sample A Female 47.2
Sample B Female 49.2
Sample C Male 45.9
Sample D Male 42.8
Subiculum
nTPM: 45.8
Samples: 4

Max nTPM: 57.5
Min nTPM: 40.9
Sample A Female 57.5
Sample B Female 40.9
Sample C Male 43.5
Sample D Male 41.2
Ventral hippocampus
nTPM: 44.4
Samples: 4

Max nTPM: 49.8
Min nTPM: 35.5
Sample A Female 49.8
Sample B Female 35.5
Sample C Male 44.0
Sample D Male 48.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.0
Samples: 4

Max nTPM: 58.9
Min nTPM: 44.4
Sample A Male 44.4
Sample B Male 47.0
Sample C Female 45.8
Sample D Female 58.9
Hippocampal formation
nTPM: 46.8
Samples: 4

Max nTPM: 51.6
Min nTPM: 42.2
Sample A Male 45.2
Sample B Male 48.2
Sample C Female 51.6
Sample D Female 42.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.5
69288962 Antisense, RP_050407_02_A11, Mouse strain C57BL/6J (56 days, male) 5.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.