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RGPD8
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1.1 nTPM
HPA:1.1 nTPM
GTEx:0.9 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 1.1
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 1.1
2048 Male, age 55, midline 2.1
2816 Male, age 47, midline 2.1
2194 Female, age 79, both hemispheres 1.2
1981 Female, age 72, midline 0.0
2565 Male, age 75, midline 0.0
Cervical spinal cord, dorsal horn
nTPM: 1.1
1877 Male, age 55, unknown 3.2
2296 Male, age 66, both hemispheres 2.0
2297 Male, age 75, both hemispheres 0.9
2069 Male, age 47, both hemispheres 0.2
2173 Female, age 72, unknown 0.2
2721 Male, age 90, both hemispheres 0.1
Cervical spinal cord, ventral horn
nTPM: 0.5
2820 Female, age 79, both hemispheres 1.7
2068 Male, age 55, unknown 1.2
2480 Male, age 75, both hemispheres 0.3
2098 Female, age 72, unknown 0.0
2295 Male, age 66, both hemispheres 0.0
2809 Male, age 90, both hemispheres 0.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 0.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 0.9
Samples: 159

Max nTPM: 2.3
Min nTPM: 0.0
Std nTPM: 0.4
Median nTPM: 0.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 2.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 2.3
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 2.0
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 2.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 1.9
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1.9
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1.8
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1.8
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 1.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1.6
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1.6
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 1.5
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1.4
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 1.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 1.3
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 1.3
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1.3
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1.3
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1.2
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 1.2
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 1.1
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 1.1
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1.1
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1.1
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1.0
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 1.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1.0
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1.0
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1.0
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 0.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 0.9
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 0.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 0.9
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 0.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 0.9
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 0.9
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 0.9
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 0.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 0.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 0.8
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 0.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 0.8
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 0.8
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 0.8
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 0.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 0.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 0.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 0.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 0.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 0.8
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 0.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 0.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 0.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 0.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 0.7
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 0.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 0.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 0.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 0.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 0.7
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 0.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 0.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 0.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 0.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 0.6
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 0.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 0.6
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 0.6
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 0.6
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 0.6
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 0.6
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 0.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 0.6
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 0.6
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 0.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 0.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 0.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 0.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 0.5
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 0.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 0.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 0.5
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 0.5
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 0.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 0.5
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 0.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 0.5
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 0.5
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 0.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 0.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 0.4
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 0.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 0.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 0.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 0.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 0.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 0.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 0.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 0.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 0.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 0.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 0.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 0.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 0.4
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 0.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 0.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 0.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 0.3
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 0.3
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 0.3
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 0.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 0.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 0.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 0.3
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 0.3
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 0.3
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 0.2
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 0.2
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 0.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 0.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 0.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 0.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 0.1
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 0.1
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 0.1
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 0.0
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