HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.8 nTPM
HPA:27.8 nTPM
GTEx:28.3 nTPM
FANTOM5:6.0 Scaled Tags Per Million
Pig:14.9 nTPM
Mouse:5.5 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024630
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.8
Sample id Sample description nTPM
Hippocampus
nTPM: 27.2
2529 Female, age 94, left hemisphere 29.4
2621 Female, age 67, right hemisphere 27.6
2148 Female, age 91, left hemisphere 27.4
1855 Male, age 76, left hemisphere 26.3
1911 Female, age 85, right hemisphere 26.3
1898 Male, age 80, left hemisphere 26.0
Dentate gyrus
nTPM: 26.7
2530 Female, age 94, left hemisphere 28.3
2531 Female, age 67, both hemispheres 28.1
2528 Male, age 74, both hemispheres 26.8
2246 Female, age 85, both hemispheres 26.7
2010 Male, age 76, both hemispheres 26.0
1927 Female, age 91, both hemispheres 24.5
Entorhinal gyrus
nTPM: 27.8
2686 Male, age 75, right hemisphere 29.5
2117 Female, age 91, right hemisphere 29.0
2764 Male, age 80, right hemisphere 28.0
1787 Male, age 76, left hemisphere 27.3
2613 Female, age 94, left hemisphere 27.3
1938 Female, age 85, left hemisphere 25.5
Hippocampus, CA1
nTPM: 25.6
2082 Female, age 91, right hemisphere 27.9
2527 Male, age 74, both hemispheres 27.1
1873 Female, age 85, both hemispheres 25.2
2749 Male, age 80, left hemisphere 24.2
2045 Male, age 76, both hemispheres 23.5
Hippocampus, CA2
nTPM: 26.3
2437 Female, age 94, left hemisphere 27.6
1963 Male, age 80, left hemisphere 27.4
2113 Female, age 91, right hemisphere 26.3
1940 Female, age 85, left hemisphere 26.0
2249 Male, age 74, both hemispheres 26.0
1892 Male, age 76, both hemispheres 24.2
Hippocampus, CA3
nTPM: 26.2
2861 Female, age 67, both hemispheres 31.1
1891 Female, age 85, both hemispheres 26.2
2436 Male, age 74, both hemispheres 25.7
2620 Female, age 94, left hemisphere 25.2
1867 Male, age 76, both hemispheres 24.8
2137 Male, age 80, left hemisphere 24.2
Parahippocampal cortex
nTPM: 26.9
2622 Female, age 67, right hemisphere 30.2
2692 Male, age 74, both hemispheres 29.4
2532 Female, age 72, left hemisphere 28.4
2245 Female, age 91, both hemispheres 26.5
2250 Female, age 67, right hemisphere 26.4
1933 Female, age 85, both hemispheres 26.0
1990 Female, age 91, right hemisphere 26.0
2018 Male, age 76, both hemispheres 25.7
2693 Female, age 94, both hemispheres 25.4
1850 Male, age 80, both hemispheres 24.9
Perirhinal gyrus
nTPM: 25.8
1794 Male, age 80, right hemisphere 27.0
2848 Male, age 76, right hemisphere 26.6
2521 Female, age 94, right hemisphere 25.6
1841 Female, age 85, right hemisphere 25.2
1847 Female, age 91, left hemisphere 24.4
Subiculum
nTPM: 26.8
2619 Male, age 74, both hemispheres 28.4
2438 Female, age 94, left hemisphere 27.9
2729 Female, age 91, right hemisphere 27.8
1977 Female, age 85, both hemispheres 25.9
2042 Male, age 76, both hemispheres 25.5
1901 Male, age 80, both hemispheres 25.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.3
Samples: 197

Max nTPM: 55.1
Min nTPM: 16.2
Std nTPM: 6.7
Median nTPM: 26.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 55.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 50.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 47.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 45.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 45.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 43.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 43.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 43.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 42.3
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 42.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 41.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.0
FF:10153-102I9 76 years, female 7.8
FF:10169-103B7 60 years, female 4.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 16.2
Min nTPM: 10.1
Sample A Female 16.2
Sample B Female 11.4
Sample C Male 15.2
Sample D Male 10.1
Entorhinal cortex
nTPM: 14.9
Samples: 4

Max nTPM: 16.2
Min nTPM: 13.6
Sample A Female 14.2
Sample B Female 15.6
Sample C Male 16.2
Sample D Male 13.6
Subiculum
nTPM: 13.5
Samples: 4

Max nTPM: 17.8
Min nTPM: 11.8
Sample A Female 17.8
Sample B Female 12.4
Sample C Male 11.8
Sample D Male 12.0
Ventral hippocampus
nTPM: 13.6
Samples: 4

Max nTPM: 17.3
Min nTPM: 10.3
Sample A Female 13.6
Sample B Female 10.3
Sample C Male 17.3
Sample D Male 13.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.5
Samples: 4

Max nTPM: 6.2
Min nTPM: 4.6
Sample A Male 6.2
Sample B Male 6.0
Sample C Female 5.1
Sample D Female 4.6
Hippocampal formation
nTPM: 5.3
Samples: 4

Max nTPM: 5.8
Min nTPM: 4.7
Sample A Male 5.7
Sample B Male 5.0
Sample C Female 4.7
Sample D Female 5.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
70539181 Antisense, RP_050324_02_D11, Mouse strain C57BL/6J (56 days, male) 1.5

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